Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr6P10140_001 | |
| GSMUA_Achr7P18480_001 | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G06290.1 | GSMUA_Achr7P18480_001 | AT2G19560.1 | 19843313 |
| AT3G06290.1 | GSMUA_AchrUn_... | AT2G39340.1 | 19843313 |
| AT3G06290.1 | GSMUA_Achr6P10140_001 | AT3G50360.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 43.19 | 35.58 |
| KRH20952 | Soybean | nucleus | 42.23 | 34.92 |
| CDY08059 | Canola | cytosol, plastid | 26.2 | 33.96 |
| KRH11322 | Soybean | nucleus | 42.07 | 33.74 |
| Solyc12g035670.1.1 | Tomato | nucleus | 40.46 | 32.27 |
| TraesCS2D01G144800.1 | Wheat | plastid | 42.63 | 32.22 |
| CDY05249 | Canola | nucleus | 29.25 | 31.44 |
| CDY24705 | Canola | cytosol, plastid | 30.13 | 30.95 |
| OQU90370 | Sorghum | plastid | 43.59 | 30.75 |
| Zm00001d022344_P001 | Maize | cytosol | 29.57 | 30.35 |
| Zm00001d022343_P001 | Maize | plastid | 44.07 | 30.34 |
| HORVU2Hr1G025040.2 | Barley | plastid | 25.88 | 30.22 |
| Bra020761.1-P | Field mustard | cytosol | 39.82 | 30.18 |
| TraesCS2A01G141300.1 | Wheat | cytosol | 42.47 | 29.94 |
| TraesCS2B01G166300.1 | Wheat | cytosol | 42.47 | 29.61 |
| AT3G06290.1 | Thale cress | plastid | 39.82 | 29.29 |
| Bra001190.1-P | Field mustard | plastid | 38.46 | 29.27 |
| CDX74111 | Canola | plastid | 37.9 | 28.7 |
| GSMUA_Achr8P09880_001 | Banana | nucleus | 9.05 | 27.76 |
| CDY70818 | Canola | mitochondrion | 7.45 | 24.41 |
| Zm00001d022346_P001 | Maize | cytosol | 37.98 | 17.29 |
Protein Annotations
| Gene3D:1.25.40.990 | MapMan:16.11.2.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0034399 |
| GO:GO:0040029 | GO:GO:0044030 | GO:GO:0060968 | GO:GO:0090065 | EnsemblPlantsGene:GSMUA_Achr5G27420_001 | EnsemblPlants:GSMUA_Achr5P27420_001 |
| EnsemblPlants:GSMUA_Achr5T27420_001 | InterPro:IPR000717 | UniProt:M0T267 | InterPro:PCI_dom | PFAM:PF03399 | PFscan:PS50250 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | InterPro:SAC3/GANP/THP3 | UniParc:UPI0002957D7E | SEG:seg | : |
Description
Putative SAC3/GANP family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G27420_001]
Coordinates
chr5:-:27930567..27948943
Molecular Weight (calculated)
141829.0 Da
IEP (calculated)
6.060
GRAVY (calculated)
-0.373
Length
1248 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTIKVIYNIL NPVTSSFVSQ LNEPLRLGHP TNHDRHLLGA THVTASHVDA KFPSQFSNYH VPARTRSPTL PSRDAANLVN HYPTADQGRE MQAKARRLAR
0101: FNFELTQPAE NLLDANRKTP ENKLSQASVD KWDADKPAEA RDSLNRENLL EIESSESSPV VVGLCPDMCP ESERGERERK GDLDKYERLD GDRNQTSKYL
0201: AVKKYNRTAE REVDLIRPMP VLQMTVDYLL NLLNQPYNED FLSIYNFLWD RMRAIRMDLR MQHIFGRQAM VMLEQMIRLH IVAMHELCEY NKGEGFSEGF
0301: DAHLNIEQMN KTSVELFQMY DDHRKQGISV PTEKEFRGYY ALLKLDKHPG YKVEPAELSL DLAKMTPEMR CTQEIVFARN VARSCRIGNF IAFFRLARKA
0401: TYLQACLMHA HFAKLRTQAL ASLHGSLQNN QGIPVTHIMS WLGLEEEDVE SILEYHGFVL KKFEESYMVK EGPFLSSDKD FPTKCSQLVH LKKSPRIIDD
0501: IYSGPPISHI TEGRETGVYN EFDMVDQRAD ASEVDTREIS SNDVIHDYEA NITQRAITQS RKLLEEQPIP LLNRETDAKV AEAFLPSSTS LVDHNVSNHA
0601: QRIEDAQMIE LENDATMDQT ILPKHEVNMV RDLASVSSPA PVSSLAPVSS LLNNVGDSSA SQMDIERELD NEDQLLVLHH KNKVAEEKLR LILRKWKHQA
0701: TKKRETREQK NTLANAALCS LSVGVPFRQS QHIPRLAYSE LNINHALRAR YEKLSKSWST INVSELVAPV LHTRNPDASC LCWKLLIPVQ PLLKEGQISR
0801: WLLSKVMGSS KENHKPIVSM PHLSIWSWIS TQLSPFYNCC LSIIQEVVFD NNDMIPEDDI VSGTSAVVFL VSESIPWEIQ KVRLHNVLAS IPSGSKLPLL
0901: ILSSDVYAEE NTDSSHSIIR RLGLHDADMT RIYSFSFLEN GDTSYFGPNH FISIFNAALD GLVEGISAAA STNVNHWPSP EVDLLEKSSN ERIFVDRYLP
1001: SIGWSSPVRI QSLIRLIKGC KLPPFVNEMP WLKEGSHMGL KIPDQKLALQ ECLISYMTQS CQMLNADLAA IEAEILVQTA AYPELHGSCY YIIPRWSAIF
1101: RRIQNWRLIN LKTGGCSVAY LLEQHLDRLT AIDYTHSIEE YRTMHSFSTK PSFDEIVEIC CNIPLAEQPM SPPEPLDSSP MVHETGDALK SENLAVDEDE
1201: DLKCNKSGNG ENGRSAISFF KMDDKLSMLL EKCTRLQDTI DEKLAFYF
0101: FNFELTQPAE NLLDANRKTP ENKLSQASVD KWDADKPAEA RDSLNRENLL EIESSESSPV VVGLCPDMCP ESERGERERK GDLDKYERLD GDRNQTSKYL
0201: AVKKYNRTAE REVDLIRPMP VLQMTVDYLL NLLNQPYNED FLSIYNFLWD RMRAIRMDLR MQHIFGRQAM VMLEQMIRLH IVAMHELCEY NKGEGFSEGF
0301: DAHLNIEQMN KTSVELFQMY DDHRKQGISV PTEKEFRGYY ALLKLDKHPG YKVEPAELSL DLAKMTPEMR CTQEIVFARN VARSCRIGNF IAFFRLARKA
0401: TYLQACLMHA HFAKLRTQAL ASLHGSLQNN QGIPVTHIMS WLGLEEEDVE SILEYHGFVL KKFEESYMVK EGPFLSSDKD FPTKCSQLVH LKKSPRIIDD
0501: IYSGPPISHI TEGRETGVYN EFDMVDQRAD ASEVDTREIS SNDVIHDYEA NITQRAITQS RKLLEEQPIP LLNRETDAKV AEAFLPSSTS LVDHNVSNHA
0601: QRIEDAQMIE LENDATMDQT ILPKHEVNMV RDLASVSSPA PVSSLAPVSS LLNNVGDSSA SQMDIERELD NEDQLLVLHH KNKVAEEKLR LILRKWKHQA
0701: TKKRETREQK NTLANAALCS LSVGVPFRQS QHIPRLAYSE LNINHALRAR YEKLSKSWST INVSELVAPV LHTRNPDASC LCWKLLIPVQ PLLKEGQISR
0801: WLLSKVMGSS KENHKPIVSM PHLSIWSWIS TQLSPFYNCC LSIIQEVVFD NNDMIPEDDI VSGTSAVVFL VSESIPWEIQ KVRLHNVLAS IPSGSKLPLL
0901: ILSSDVYAEE NTDSSHSIIR RLGLHDADMT RIYSFSFLEN GDTSYFGPNH FISIFNAALD GLVEGISAAA STNVNHWPSP EVDLLEKSSN ERIFVDRYLP
1001: SIGWSSPVRI QSLIRLIKGC KLPPFVNEMP WLKEGSHMGL KIPDQKLALQ ECLISYMTQS CQMLNADLAA IEAEILVQTA AYPELHGSCY YIIPRWSAIF
1101: RRIQNWRLIN LKTGGCSVAY LLEQHLDRLT AIDYTHSIEE YRTMHSFSTK PSFDEIVEIC CNIPLAEQPM SPPEPLDSSP MVHETGDALK SENLAVDEDE
1201: DLKCNKSGNG ENGRSAISFF KMDDKLSMLL EKCTRLQDTI DEKLAFYF
0001: MGTDAVEIGR SQDSKRKSRS DILPDQNMGF SRRNQSPVSG FENGNLVDGF QPLSSRTWMR SPSSAENNPV RSRSNPNQLI HQEQTGNSSF PYAHEVAEIQ
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.