Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24705 | Canola | cytosol, plastid | 86.39 | 82.55 |
| CDY08059 | Canola | cytosol, plastid | 44.44 | 53.58 |
| CDY70818 | Canola | mitochondrion | 16.88 | 51.44 |
| Bra020761.1-P | Field mustard | cytosol | 72.09 | 50.82 |
| AT3G06290.1 | Thale cress | plastid | 62.36 | 42.66 |
| CDX74111 | Canola | plastid | 58.4 | 41.14 |
| CDY07542 | Canola | plastid | 9.82 | 29.46 |
| GSMUA_Achr5P27420_001 | Banana | cytosol | 31.44 | 29.25 |
| CDX67598 | Canola | plastid | 9.65 | 29.17 |
| HORVU2Hr1G025040.2 | Barley | plastid | 26.44 | 28.72 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 37.3 | 28.58 |
| KRH20952 | Soybean | nucleus | 36.52 | 28.1 |
| KRH11322 | Soybean | nucleus | 36.78 | 27.44 |
| Solyc12g035670.1.1 | Tomato | nucleus | 35.49 | 26.33 |
| TraesCS2D01G144800.1 | Wheat | plastid | 31.01 | 21.8 |
| Zm00001d022343_P001 | Maize | plastid | 31.96 | 20.46 |
| OQU90370 | Sorghum | plastid | 31.09 | 20.41 |
| TraesCS2B01G166300.1 | Wheat | cytosol | 31.44 | 20.39 |
| TraesCS2A01G141300.1 | Wheat | cytosol | 31.01 | 20.34 |
| Zm00001d022344_P001 | Maize | cytosol | 14.9 | 14.23 |
| CDY24706 | Canola | cytosol | 3.7 | 13.78 |
| Zm00001d022346_P001 | Maize | cytosol | 26.1 | 11.05 |
Protein Annotations
| EnsemblPlants:CDY05249 | EnsemblPlantsGene:GSBRNA2T00120068001 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | PFAM:PF03399 | PFscan:PS50250 | ProteinID:CDY05249 | ProteinID:CDY05249.1 |
| SEG:seg | UniParc:UPI0004EE6F62 | MapMan:16.11.2.1 | : | : | : |
Description
BnaC05g45540D
Coordinates
chrLK031960:-:587072..593849
Molecular Weight (calculated)
129572.0 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.676
Length
1161 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFKPFGKDV GPAMSSKPSS FTTFGASDPT QSTSDSPIQP PTYQNHSGYA GRSFGPGGIQ SGPPIQRAPS PSASQNPSPS GGYSSPAMNR TSPPVAFQNP
0101: SHSSGQSYRP GGTQRSPGPV NVHWGPEAFP RPIPSVRPYQ FPGVQRSYNS SRKTEQGLAE CYRPTLNPQF GHDESRNFQK DHSERSLATS SASTSHTLSR
0201: SGTDVVEIGR SQDSKRKSRS DVLPDRSLGV SRRNHSPGSG FGIGRLVDDF QQSSSQTWIR SPSSADNNPV RSRINPNRLI HQEQSPSSSF PYAHEAAEIQ
0301: EATKRKSSAI APSDSFLHNN PVFSQDDTRR SSTSPPGTKS FMLSRSSDSQ FTGQSPLSPP FYPVEDDIQG NSFLSQSFTE GEEQARAKRL ARFKGELDPV
0401: PARPESNRDV LKGDALSDFE SSEQPSLIVG LCPDMCPESE RGEREKKGDL DHYERVDGDR NQTSKSLAVK KYTRTAEREA ILIRPMPILQ NTMEYLLSYR
0501: PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NREAITLLEQ MIRLHIIAMH ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK GGTTIPTEKE
0601: FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARSVARAG RTGNFIAFFR LARKASYLQA CLMHAHFSRL RTHALTSLHA GLLNNQGLPV
0701: SDTSKWIGME EEDIEALLEY HGFSIKVFEE PYMVKANKGY QQETPPPQSL KKQTSLRLVD KVMTDSKTSL LLEEDKPVRT SVINPVRPSD VKPAVDQQNR
0801: NHFTPAGEFH SPGFPQAESL NLKKQPNGGH TSTSPAEIKF PFAEHMQTNL VPGSILQQKS PTRVENISAL EESVPEAAMT VTLEEGFDDI EQEDEDGHED
0901: ITSQYEEEVA KAKLKLIIRL WKRWSSRQSE LRERRQLAAA AALNSLTLGT PIRLSKTDRA CGEFDIDQAM KRRFEEREKS WSRLNISDVV ADILVERNPD
1001: SKCIWWKVIL CTQIKSVDSS SQDTHSAASR WLSSKLIPDT EHSISDDNLL FSSPGVSVWN KWVASGSDSD SRCCLSVARD VEADNDPRGA SAVLFLASKS
1101: IPLNLQREHL NRILESVPNR SLLPLLVLTS SSNGESQASP SFLSLITPRR DTKFVFSAIR G
0101: SHSSGQSYRP GGTQRSPGPV NVHWGPEAFP RPIPSVRPYQ FPGVQRSYNS SRKTEQGLAE CYRPTLNPQF GHDESRNFQK DHSERSLATS SASTSHTLSR
0201: SGTDVVEIGR SQDSKRKSRS DVLPDRSLGV SRRNHSPGSG FGIGRLVDDF QQSSSQTWIR SPSSADNNPV RSRINPNRLI HQEQSPSSSF PYAHEAAEIQ
0301: EATKRKSSAI APSDSFLHNN PVFSQDDTRR SSTSPPGTKS FMLSRSSDSQ FTGQSPLSPP FYPVEDDIQG NSFLSQSFTE GEEQARAKRL ARFKGELDPV
0401: PARPESNRDV LKGDALSDFE SSEQPSLIVG LCPDMCPESE RGEREKKGDL DHYERVDGDR NQTSKSLAVK KYTRTAEREA ILIRPMPILQ NTMEYLLSYR
0501: PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NREAITLLEQ MIRLHIIAMH ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK GGTTIPTEKE
0601: FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARSVARAG RTGNFIAFFR LARKASYLQA CLMHAHFSRL RTHALTSLHA GLLNNQGLPV
0701: SDTSKWIGME EEDIEALLEY HGFSIKVFEE PYMVKANKGY QQETPPPQSL KKQTSLRLVD KVMTDSKTSL LLEEDKPVRT SVINPVRPSD VKPAVDQQNR
0801: NHFTPAGEFH SPGFPQAESL NLKKQPNGGH TSTSPAEIKF PFAEHMQTNL VPGSILQQKS PTRVENISAL EESVPEAAMT VTLEEGFDDI EQEDEDGHED
0901: ITSQYEEEVA KAKLKLIIRL WKRWSSRQSE LRERRQLAAA AALNSLTLGT PIRLSKTDRA CGEFDIDQAM KRRFEEREKS WSRLNISDVV ADILVERNPD
1001: SKCIWWKVIL CTQIKSVDSS SQDTHSAASR WLSSKLIPDT EHSISDDNLL FSSPGVSVWN KWVASGSDSD SRCCLSVARD VEADNDPRGA SAVLFLASKS
1101: IPLNLQREHL NRILESVPNR SLLPLLVLTS SSNGESQASP SFLSLITPRR DTKFVFSAIR G
0001: MAFRPFGKDL GPMSSKPAPF TPFGASSTTS DSSIQPPASQ NHSAFAGQSF GPGGIRSGPS IQRAPPLSAS QNPQLSIGKP YRPGGVQSVP PINRIPSPSA
0101: FQNPSPSSGQ PYQPGGIQRI PEPFNGIAWG PEASRTSPSV RPYQFPGVQR PNLNPQYGHD GSRNFLKDHG EHSRATSPPA TSHILSRMGT DAVEIGRSQD
0201: SKRKSRSDIL PDQNMGFSRR NQSPVSGFEN GNLVDGFQPL SSRTWMRSPS SAENNPVRSR SNPNQLIHQE QTGNSSFPYA HEVAEIQEAT RRKSSAVAPS
0301: DKPLGDDPIL SQHDSQRFST SPPTSGTKSY TLSRSSDSQF PGQPSSVNSF NNARKTNSSP ATKRTRSPPV YPIEEDIPRN SFPSQDCTEG EEQARAKRLA
0401: RFKGELEPIA DRPVDIQLTK SPVNKTMKPL DNKQTFNSLE SSRDALKGDA LPDYENSEQP SLIIGVCPDM CPESERGERE RKGDLDHYER VDGDRNQTSK
0501: SLAVKKYTRT AEREAILIRP MPILQNTMEY LLSLLDRPYN ENFLGMYNFL WDRMRAIRMD LRMQHIFNQE AITLLEQMIR LHIIAMHELC EYTKGEGFSE
0601: GFDAHLNIEQ MNKTSVELFQ MYDDHRKKGI TVPTEKEFRG YYALLKLDKH PGYKVEPSEL SLDLANMTPE IRQTSEVLFA RNVARACRTG NFIAFFRLAR
0701: KASYLQACLM HAHFSKLRTQ ALASLHSGLQ INQGLPVSDM SNWIGMEEED IEALLEYHGF SIKVFEEPYM VKNDLFLHAD KDYKTKCSKL VHMKKSRTIV
0801: EDVSAPTVVE DVSTPFPLPS LITEATIGNQ QCITAHKHEM PPARSLKKQT SMRLFDKEVA DSKTSLLAEE DKPMGTFVMN PPGPFVINPV VHQEKQNDLT
0901: SAGGFHSPVK LYSPFGSPKF PQTKSSNLEK QPNDDRIGMS PGEIKFSIIG DVYTNHVPGP ALQQSPKSMP MEIMPVTTIA ECPTSVENKY ALEESVPEAA
1001: MICTLEKEFN DIDEEDEDED GVILNQYDEE VAKAKLKLII RLWKRWSSRQ SELRERRQLA AAAALNSLSL GTPIRFSKTD QSRACGEFNI DQAMRRRFEE
1101: REKSWSRLNI SDVIADILVG RNPESKCISW KVVLCTQTKS VNSSSSASQV THSAASRWLS SKLMPHAEHS SLNDDNLLFS APGVSVWNKW VANGSDIDFT
1201: CCLSVARDVE AENDMCETTC GASAVLFLAS GGLPLNLQRE QLNLILESVP NGSVLPLLVV ISSCNGEHME PDTDIVSGLG LHDIDKSKIA SFSIVSIANK
1301: SQKGQEVHFF NDSRLRDGFK WLASNSPLQP NLHHVKLREL FLTHFSFSLE LLKQMPDQEV GPNICISAFN DALETSRRNI TSAAEANPIG WPCPETMLLE
1401: DNRKECLMVK RYLPNLDWSS AENVELLSSV LENCKLPDFE DDLTWLTVGC ASGAEIENHT QRLEGCLIEY LTQRSNLMGV SLATKETGVM LERNTRLELH
1501: NSSRYHITPR WIGIFQRIFN WRIMGLFDAS SSSAYVLKSD LNMSTSSYAD KFLAEDASYP SCPPNLPLLH EMIEISCSPL KSPPPYDDKA QRVVETGMLI
1601: DDHRDIEESM LEKNREACRG IDLMITEDDE LGERSWRSKG REAAEKKTIE KRESERLDEL LEKCNMVQNS IAEKLCIYF
0101: FQNPSPSSGQ PYQPGGIQRI PEPFNGIAWG PEASRTSPSV RPYQFPGVQR PNLNPQYGHD GSRNFLKDHG EHSRATSPPA TSHILSRMGT DAVEIGRSQD
0201: SKRKSRSDIL PDQNMGFSRR NQSPVSGFEN GNLVDGFQPL SSRTWMRSPS SAENNPVRSR SNPNQLIHQE QTGNSSFPYA HEVAEIQEAT RRKSSAVAPS
0301: DKPLGDDPIL SQHDSQRFST SPPTSGTKSY TLSRSSDSQF PGQPSSVNSF NNARKTNSSP ATKRTRSPPV YPIEEDIPRN SFPSQDCTEG EEQARAKRLA
0401: RFKGELEPIA DRPVDIQLTK SPVNKTMKPL DNKQTFNSLE SSRDALKGDA LPDYENSEQP SLIIGVCPDM CPESERGERE RKGDLDHYER VDGDRNQTSK
0501: SLAVKKYTRT AEREAILIRP MPILQNTMEY LLSLLDRPYN ENFLGMYNFL WDRMRAIRMD LRMQHIFNQE AITLLEQMIR LHIIAMHELC EYTKGEGFSE
0601: GFDAHLNIEQ MNKTSVELFQ MYDDHRKKGI TVPTEKEFRG YYALLKLDKH PGYKVEPSEL SLDLANMTPE IRQTSEVLFA RNVARACRTG NFIAFFRLAR
0701: KASYLQACLM HAHFSKLRTQ ALASLHSGLQ INQGLPVSDM SNWIGMEEED IEALLEYHGF SIKVFEEPYM VKNDLFLHAD KDYKTKCSKL VHMKKSRTIV
0801: EDVSAPTVVE DVSTPFPLPS LITEATIGNQ QCITAHKHEM PPARSLKKQT SMRLFDKEVA DSKTSLLAEE DKPMGTFVMN PPGPFVINPV VHQEKQNDLT
0901: SAGGFHSPVK LYSPFGSPKF PQTKSSNLEK QPNDDRIGMS PGEIKFSIIG DVYTNHVPGP ALQQSPKSMP MEIMPVTTIA ECPTSVENKY ALEESVPEAA
1001: MICTLEKEFN DIDEEDEDED GVILNQYDEE VAKAKLKLII RLWKRWSSRQ SELRERRQLA AAAALNSLSL GTPIRFSKTD QSRACGEFNI DQAMRRRFEE
1101: REKSWSRLNI SDVIADILVG RNPESKCISW KVVLCTQTKS VNSSSSASQV THSAASRWLS SKLMPHAEHS SLNDDNLLFS APGVSVWNKW VANGSDIDFT
1201: CCLSVARDVE AENDMCETTC GASAVLFLAS GGLPLNLQRE QLNLILESVP NGSVLPLLVV ISSCNGEHME PDTDIVSGLG LHDIDKSKIA SFSIVSIANK
1301: SQKGQEVHFF NDSRLRDGFK WLASNSPLQP NLHHVKLREL FLTHFSFSLE LLKQMPDQEV GPNICISAFN DALETSRRNI TSAAEANPIG WPCPETMLLE
1401: DNRKECLMVK RYLPNLDWSS AENVELLSSV LENCKLPDFE DDLTWLTVGC ASGAEIENHT QRLEGCLIEY LTQRSNLMGV SLATKETGVM LERNTRLELH
1501: NSSRYHITPR WIGIFQRIFN WRIMGLFDAS SSSAYVLKSD LNMSTSSYAD KFLAEDASYP SCPPNLPLLH EMIEISCSPL KSPPPYDDKA QRVVETGMLI
1601: DDHRDIEESM LEKNREACRG IDLMITEDDE LGERSWRSKG REAAEKKTIE KRESERLDEL LEKCNMVQNS IAEKLCIYF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.