Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G50360.1 | Thale cress | cytosol | 78.53 | 88.76 |
| CDY62753 | Canola | cytosol | 90.05 | 86.0 |
| KRH10567 | Soybean | endoplasmic reticulum | 69.11 | 77.65 |
| VIT_05s0094g01240.t01 | Wine grape | cytosol | 65.97 | 76.36 |
| TraesCS2D01G173900.1 | Wheat | cytosol, mitochondrion | 65.97 | 75.0 |
| TraesCS2B01G192400.1 | Wheat | cytosol, mitochondrion | 65.97 | 75.0 |
| TraesCS2A01G166500.1 | Wheat | cytosol, mitochondrion | 65.97 | 75.0 |
| Solyc02g090810.2.1 | Tomato | cytosol, mitochondrion | 65.97 | 75.0 |
| PGSC0003DMT400010295 | Potato | cytosol, mitochondrion | 65.97 | 75.0 |
| HORVU2Hr1G030640.1 | Barley | cytosol | 65.97 | 74.56 |
| Solyc04g026350.2.1 | Tomato | cytosol | 66.49 | 73.41 |
| KRH43884 | Soybean | cytosol | 49.74 | 72.52 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 60.73 | 71.17 |
| Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 63.35 | 70.35 |
| KRG98826 | Soybean | cytosol | 55.5 | 67.52 |
| KXG36700 | Sorghum | cytosol | 60.21 | 66.86 |
| KRG98823 | Soybean | cytosol | 53.93 | 65.61 |
| VIT_07s0031g00700.t01 | Wine grape | cytosol | 65.97 | 62.38 |
| CDX75623 | Canola | extracellular | 57.07 | 60.56 |
| Zm00001d014271_P001 | Maize | cytosol | 56.54 | 60.34 |
| TraesCS7B01G412100.1 | Wheat | cytosol | 57.07 | 60.22 |
| Os07t0618800-01 | Rice | plasma membrane | 65.44 | 59.81 |
| HORVU7Hr1G113200.1 | Barley | cytosol | 56.54 | 59.67 |
| Os10t0389000-01 | Rice | plasma membrane | 58.64 | 58.64 |
| CDX99690 | Canola | cytosol | 36.13 | 46.31 |
| CDX96148 | Canola | cytosol | 35.6 | 45.64 |
| CDY55678 | Canola | cytosol | 35.6 | 45.64 |
| CDY04474 | Canola | cytosol | 35.08 | 44.97 |
| CDY56411 | Canola | cytosol | 35.08 | 44.97 |
| CDX92401 | Canola | cytosol | 31.41 | 44.78 |
| CDY27651 | Canola | cytosol | 35.08 | 44.67 |
| CDY65072 | Canola | cytosol | 34.55 | 44.3 |
| CDX94883 | Canola | cytosol | 25.65 | 44.14 |
| CDY12321 | Canola | cytosol | 33.51 | 44.14 |
| CDY10686 | Canola | cytosol | 35.6 | 43.87 |
| CDY34215 | Canola | cytosol | 35.6 | 43.59 |
| CDX92965 | Canola | cytosol | 35.08 | 43.51 |
| CDY10325 | Canola | cytosol | 25.65 | 43.36 |
| CDY06478 | Canola | cytosol | 31.41 | 39.74 |
| CDX75970 | Canola | cytosol | 23.56 | 39.47 |
| CDY40824 | Canola | cytosol | 35.6 | 37.78 |
| CDY48191 | Canola | cytosol | 35.08 | 37.43 |
| CDX77060 | Canola | cytosol | 35.08 | 37.22 |
| CDY57144 | Canola | cytosol | 25.13 | 32.88 |
| CDY30947 | Canola | cytosol | 35.08 | 32.06 |
| CDY19221 | Canola | cytosol | 24.61 | 29.94 |
| CDY26151 | Canola | cytosol | 24.61 | 29.94 |
| CDY21220 | Canola | cytosol | 34.55 | 29.86 |
| CDY21044 | Canola | cytosol | 22.51 | 29.05 |
| CDY26556 | Canola | cytosol | 22.51 | 29.05 |
| CDY30070 | Canola | cytosol | 22.51 | 29.05 |
| CDX98074 | Canola | cytosol | 22.51 | 29.05 |
| CDY31259 | Canola | cytosol | 22.51 | 29.05 |
| CDY15991 | Canola | cytosol | 22.51 | 29.05 |
| CDY54677 | Canola | cytosol | 24.61 | 28.31 |
| CDY61824 | Canola | cytosol | 24.61 | 28.31 |
| CDY21702 | Canola | cytosol | 23.04 | 28.21 |
| CDX81878 | Canola | cytosol | 23.04 | 28.21 |
| CDY04172 | Canola | cytosol | 22.51 | 26.71 |
| CDY59874 | Canola | cytosol | 22.51 | 26.71 |
| CDY58544 | Canola | cytosol | 23.56 | 26.63 |
| CDY48076 | Canola | cytosol | 22.51 | 26.54 |
| CDY51605 | Canola | cytosol | 22.51 | 26.54 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:14.6.1.1 | MapMan:16.11.2.3 | GO:A0A078D7A8 | EnsemblPlants:CDX83123 | ProteinID:CDX83123 |
| ProteinID:CDX83123.1 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00138641001 | InterPro:IPR002048 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR23050 | PANTHER:PTHR23050:SF167 | SMART:SM00054 | SUPFAM:SSF47473 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI0004EE4018 | : | : | : | : | : |
Description
BnaA01g21230D
Coordinates
chrLK031831:+:1837740..1839295
Molecular Weight (calculated)
22247.5 Da
IEP (calculated)
4.510
GRAVY (calculated)
-0.586
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCLVLCWFL YECFLFLKLS CVLSSLYRGV SRKEKPRRHH GLNQQKRQEI KEAFDLFDTD GSGTIDAKEL NVAMRALGFE MTEEQIEKMI ADVDKDGSGA
101: IDYDEFYYMM TAKIGERDTK EELTKAFKII DLDNNGKISA DDIKRMAKDL GENFTDAEIR EMVEEADRDR DGEVNMEEFM RMMKRTAAYE Y
101: IDYDEFYYMM TAKIGERDTK EELTKAFKII DLDNNGKISA DDIKRMAKDL GENFTDAEIR EMVEEADRDR DGEVNMEEFM RMMKRTAAYE Y
001: MSSIYRTVSR KEKPRRHHGL TTQKKQEIKE AFELFDTDGS GTIDAKELNV AMRALGFEMT EEQINKMIAD VDKDGSGAID FDEFVHMMTA KIGERDTKEE
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
Arabidopsis Description
CML20Probable calcium-binding protein CML20 [Source:UniProtKB/Swiss-Prot;Acc:O82659]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.