Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
18260611
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0836400-02 | |
| Os05t0462600-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G50360.1 | Os01t0836400-02 | AT2G39340.1 | 19843313 |
| AT3G50360.1 | Os05t0462600-01 | AT2G39340.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G166500.1 | Wheat | cytosol, mitochondrion | 74.16 | 92.26 |
| TraesCS2B01G192400.1 | Wheat | cytosol, mitochondrion | 74.16 | 92.26 |
| TraesCS2D01G173900.1 | Wheat | cytosol, mitochondrion | 74.16 | 92.26 |
| HORVU2Hr1G030640.1 | Barley | cytosol | 73.68 | 91.12 |
| Zm00001d022160_P003 | Maize | cytosol, mitochondrion | 70.81 | 86.05 |
| KXG36700 | Sorghum | cytosol | 65.07 | 79.07 |
| AT3G50360.1 | Thale cress | cytosol | 60.77 | 75.15 |
| KRH10567 | Soybean | endoplasmic reticulum | 60.29 | 74.12 |
| Solyc04g026350.2.1 | Tomato | cytosol | 59.81 | 72.25 |
| VIT_05s0094g01240.t01 | Wine grape | cytosol | 56.46 | 71.52 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 55.02 | 70.55 |
| PGSC0003DMT400010295 | Potato | cytosol, mitochondrion | 56.46 | 70.24 |
| Solyc02g090810.2.1 | Tomato | cytosol, mitochondrion | 56.46 | 70.24 |
| KRH43884 | Soybean | cytosol | 42.11 | 67.18 |
| KRG98826 | Soybean | cytosol | 49.76 | 66.24 |
| KRG98823 | Soybean | cytosol | 49.76 | 66.24 |
| CDX83123 | Canola | golgi | 59.81 | 65.44 |
| CDY62753 | Canola | cytosol | 62.2 | 65.0 |
| CDX75623 | Canola | extracellular | 53.11 | 61.67 |
| AT4G37010.2 | Thale cress | cytosol, mitochondrion | 49.76 | 60.82 |
| VIT_07s0031g00700.t01 | Wine grape | cytosol | 57.89 | 59.9 |
| Os10t0389000-01 | Rice | plasma membrane | 54.07 | 59.16 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 31.58 | 44.3 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 31.1 | 43.62 |
| Os07t0687200-02 | Rice | cytosol | 31.1 | 43.62 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 31.1 | 43.62 |
| Os01t0267900-01 | Rice | cytosol | 31.1 | 43.62 |
| Os11t0586200-00 | Rice | cytosol | 28.23 | 39.07 |
| Os03t0743500-02 | Rice | nucleus | 27.75 | 37.66 |
| Os12t0603800-00 | Rice | cytosol | 28.23 | 35.54 |
| Os01t0810300-01 | Rice | plasma membrane | 28.71 | 32.09 |
| Os08t0117400-01 | Rice | plasma membrane | 22.49 | 31.76 |
| Os05t0491000-01 | Rice | cytosol | 21.05 | 28.39 |
| Os05t0577500-01 | Rice | cytosol, mitochondrion | 21.05 | 25.43 |
| Os01t0604500-01 | Rice | cytosol | 23.92 | 20.08 |
| Os01t0505600-01 | Rice | cytosol | 20.1 | 19.91 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:14.6.1.1 | MapMan:16.11.2.3 | UniProt:A0A0N7KNV5 | ProteinID:BAT02674.1 | InterPro:EF-hand-dom_pair |
| InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0046872 |
| InterPro:IPR002048 | EnsemblPlantsGene:Os07g0618800 | EnsemblPlants:Os07t0618800-01 | PFAM:PF13499 | ScanProsite:PS00018 | PFscan:PS50222 |
| PANTHER:PTHR23050 | PANTHER:PTHR23050:SF167 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000393ACA2 | SEG:seg |
Description
CALMODULIN-LIKE PROTEIN 13Similar to caltractin. (Os07t0618800-01)
Coordinates
chr7:+:25540492..25542689
Molecular Weight (calculated)
24445.7 Da
IEP (calculated)
9.916
GRAVY (calculated)
-1.232
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: ALQRHRSPAR RRRRRRRRSR RDRRRAQPSR RSPATPDLSN MSTVKGQTRR ERPRGARPHG LTKQKRQEIK EAFDLFDTDN SGTIDAKELN VAMRALGFEM
101: TEEQINQMIA DVDKDGSGSI DYEEFEHMMT AKIGERDSKE ELTKAFSIID QDKNGKISDV DIQRIAKELG ENFTYQEIQE MVQEADRNGD GEIDFDEFIR
201: MMRRTGYGY
101: TEEQINQMIA DVDKDGSGSI DYEEFEHMMT AKIGERDSKE ELTKAFSIID QDKNGKISDV DIQRIAKELG ENFTYQEIQE MVQEADRNGD GEIDFDEFIR
201: MMRRTGYGY
001: MSSIYRTVSR KEKPRRHHGL TTQKKQEIKE AFELFDTDGS GTIDAKELNV AMRALGFEMT EEQINKMIAD VDKDGSGAID FDEFVHMMTA KIGERDTKEE
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
101: LTKAFQIIDL DKNGKISPDD IKRMAKDLGE NFTDAEIREM VEEADRDRDG EVNMDEFMRM MRRTAYGGN
Arabidopsis Description
CML20Probable calcium-binding protein CML20 [Source:UniProtKB/Swiss-Prot;Acc:O82659]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.