Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os07t0618800-01 | |
| Os09t0386400-01 | |
| Os10t0389000-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G39340.1 | Os09t0386400-01 | AT2G19560.1 | 19843313 |
| AT2G39340.1 | Os07t0618800-01 | AT3G50360.1 | 19843313 |
| AT2G39340.1 | Os10t0389000-01 | AT3G50360.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G354400.3 | Wheat | nucleus | 73.96 | 62.59 |
| TraesCS3D01G348300.1 | Wheat | cytosol | 73.96 | 61.07 |
| TraesCS3B01G387400.1 | Wheat | nucleus | 73.85 | 60.21 |
| OQU87820 | Sorghum | nucleus | 58.32 | 56.88 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 70.02 | 54.42 |
| Os05t0462600-01 | Rice | mitochondrion | 46.28 | 50.66 |
| VIT_13s0067g03720.t01 | Wine grape | plastid | 25.49 | 46.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.28 | 43.83 |
| KRG92986 | Soybean | nucleus | 42.67 | 38.77 |
| KRH36229 | Soybean | nucleus | 42.34 | 38.32 |
| CDY07001 | Canola | nucleus | 39.28 | 36.56 |
| Solyc05g054910.2.1 | Tomato | nucleus | 38.4 | 36.52 |
| Bra017081.1-P | Field mustard | nucleus | 39.28 | 36.52 |
| CDX93271 | Canola | nucleus | 39.39 | 36.51 |
| CDX74854 | Canola | nucleus | 39.06 | 35.95 |
| Bra005052.1-P | Field mustard | nucleus | 39.06 | 35.95 |
| Bra005050.1-P | Field mustard | nucleus | 39.06 | 35.95 |
| CDY44640 | Canola | nucleus | 39.61 | 35.95 |
| AT2G39340.1 | Thale cress | nucleus | 39.28 | 35.69 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 13.57 | 31.16 |
Protein Annotations
| EnsemblPlants:Os01t0836400-02 | EnsemblPlantsGene:Os01g0836400 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| ncoils:Coil | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF28 | PFAM:PF03399 | PFscan:PS50250 | ProteinID:BAF06645.1 |
| ProteinID:BAS75109.1 | SEG:seg | UniParc:UPI0000DD8DD7 | UniProt:Q0JHY3 | MapMan:16.11.2.1 | : |
Description
Hypothetical conserved gene. (Os01t0836400-01);SAC3/GANP family protein. (Os01t0836400-02)
Coordinates
chr1:+:35845280..35854963
Molecular Weight (calculated)
99811.8 Da
IEP (calculated)
8.732
GRAVY (calculated)
-0.763
Length
914 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQGGEAAA GSDAKPTAGT GMEQPSPSPY QPSASDHHLW SSSTGAPWNY SMNNSNQNTV YYDPQRDVSV PGSTENVTSG ATHVVQSAMG ITGATDSYAP
101: YSNSVQPGYN APQYPNYYYN CPQSTNESSV QQGVDQSSGA AYQPLTSFQN SGSYVGPTSN TYYNAGAHQT APGYATSNNY YQSNSWTGGS SGDNHVQSYQ
201: SYTPSDTNAA QSSSSLPNNS YHYHQQYNQW PYYYDQSAPS SGGPAVAVSS VSDANTASVS SGYVYPSTQP PPPGTTWRSD AGATAVPPPQ APGTPVFQNQ
301: HVNQAAGPPG YQNQYVNQAP GTPGFQNQYV NQAPAVPGFQ NQYANLAPTY QPGTTYYSQL PLSNQADQQK ASRWQGPISN VSSVNHVSES SQPTFQGSAT
401: SDALRVNKIQ IPTNPRIAPT LPMAMPKVEK RNLEADSSKK PAYVSVAVQK NDVKAAQDGH EAVTQGSIPV SLRTYVGRNV SRCKDDAQRS AVQNILKEII
501: TKATADGILH TKNWDIEPLV PLPENITSTN LTSSAKDLSP FSFSTSRRSP SRRAKSRWEP VVEEKVANKV ELISKESAKT NTYNSSETTK RAGRSWDIGK
601: FLQSRQAPLS QYNQRPSKKK RIGGNSSLTE NGNVSSDSDK EQDLTKYYAN AITIANSPEE KKRREHRSKR FERSQGAASS KSRSSVPDKD GTSNTYARRS
701: MPMLLSRSNG DDVSFAVEDL DWDALTVKGT CQEIEKRYLR LTSAPDPATV RPEDVLEKAL HMVETSQKNY LYKCDQLKSI RQDLTVQRIQ NELTVMVYET
801: HARLALQSGD LPEFNQCQSQ LKRLYAEGIK GCHFEFSAYN LLCVMLHSNN KRDLLSSMAS LPKEAKQDRT VKHALAVHSA VSSGNYVLFF KLYKTAPDLN
901: SCLMGKYDLP LSVI
101: YSNSVQPGYN APQYPNYYYN CPQSTNESSV QQGVDQSSGA AYQPLTSFQN SGSYVGPTSN TYYNAGAHQT APGYATSNNY YQSNSWTGGS SGDNHVQSYQ
201: SYTPSDTNAA QSSSSLPNNS YHYHQQYNQW PYYYDQSAPS SGGPAVAVSS VSDANTASVS SGYVYPSTQP PPPGTTWRSD AGATAVPPPQ APGTPVFQNQ
301: HVNQAAGPPG YQNQYVNQAP GTPGFQNQYV NQAPAVPGFQ NQYANLAPTY QPGTTYYSQL PLSNQADQQK ASRWQGPISN VSSVNHVSES SQPTFQGSAT
401: SDALRVNKIQ IPTNPRIAPT LPMAMPKVEK RNLEADSSKK PAYVSVAVQK NDVKAAQDGH EAVTQGSIPV SLRTYVGRNV SRCKDDAQRS AVQNILKEII
501: TKATADGILH TKNWDIEPLV PLPENITSTN LTSSAKDLSP FSFSTSRRSP SRRAKSRWEP VVEEKVANKV ELISKESAKT NTYNSSETTK RAGRSWDIGK
601: FLQSRQAPLS QYNQRPSKKK RIGGNSSLTE NGNVSSDSDK EQDLTKYYAN AITIANSPEE KKRREHRSKR FERSQGAASS KSRSSVPDKD GTSNTYARRS
701: MPMLLSRSNG DDVSFAVEDL DWDALTVKGT CQEIEKRYLR LTSAPDPATV RPEDVLEKAL HMVETSQKNY LYKCDQLKSI RQDLTVQRIQ NELTVMVYET
801: HARLALQSGD LPEFNQCQSQ LKRLYAEGIK GCHFEFSAYN LLCVMLHSNN KRDLLSSMAS LPKEAKQDRT VKHALAVHSA VSSGNYVLFF KLYKTAPDLN
901: SCLMGKYDLP LSVI
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.