Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G348300.1 | Wheat | cytosol | 92.31 | 90.06 |
| TraesCS3B01G387400.1 | Wheat | nucleus | 93.33 | 89.92 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 87.22 | 80.1 |
| Os01t0836400-02 | Rice | nucleus | 62.59 | 73.96 |
| OQU87820 | Sorghum | nucleus | 57.31 | 66.06 |
| TraesCS1A01G287600.8 | Wheat | nucleus | 54.72 | 60.99 |
| VIT_13s0067g03720.t01 | Wine grape | plastid | 27.13 | 58.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.09 | 50.47 |
| KRG92986 | Soybean | nucleus | 39.63 | 42.54 |
| KRH36229 | Soybean | nucleus | 39.54 | 42.28 |
| Solyc05g054910.2.1 | Tomato | nucleus | 37.04 | 41.62 |
| CDX74854 | Canola | nucleus | 37.31 | 40.58 |
| Bra005052.1-P | Field mustard | nucleus | 37.22 | 40.48 |
| Bra005050.1-P | Field mustard | nucleus | 37.22 | 40.48 |
| Bra017081.1-P | Field mustard | nucleus | 36.76 | 40.39 |
| CDX93271 | Canola | nucleus | 36.85 | 40.37 |
| AT2G39340.1 | Thale cress | nucleus | 37.5 | 40.26 |
| CDY07001 | Canola | nucleus | 36.57 | 40.22 |
| CDY44640 | Canola | nucleus | 37.41 | 40.12 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 10.56 | 28.64 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G354400.3 | EnsemblPlantsGene:TraesCS3A01G354400 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF28 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg | MapMan:16.11.2.1 |
Description
No Description!
Coordinates
chr3A:+:602014262..602024692
Molecular Weight (calculated)
117098.0 Da
IEP (calculated)
7.415
GRAVY (calculated)
-0.727
Length
1080 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAQGGEAAA GSDPKPNEGW SVEQTSSSQY QPSASGHHAW SSSSGASWNY SVDNTNQNAV YYDPQRDVSV SGATQNVTNG APHVTQPAVG TTNATNTYAP
0101: YSNSVQPAYN AAQYPNYYHN YPQPANDSSL HQGVDQSSGA AYQPLTSFPN SGSYVGPTSN TYYNAGADQT AQAYATNNYY YQNQAWSGGS SGDVHAQTYQ
0201: TYAPSDTNAA QSSCSLPTTS FHYPQQYNQW SNYYDQSAPN SGALAVAGNS ASDTKSPSAG SGYTYPSTQP PPPGTTQRKN DAVAPTAPPQ AVGITGFQSQ
0301: HVNQAPGAPG FQSQHVNQAP GAPGFQSQHV NQAPGAPGFQ SQHVNPAPGV QGFQSQYVNL SPDTPGFQSQ HVNPAPVTPG FQSQHLNQAP GNPGYENPYA
0401: NKTAAVSGFQ NHYINQAPAY QQNSTSHSQL PLSNQRDQQK ALHAQGPSSN VYSVNHVNEN SQPTLQGFAK TVASVNKVHI PTNPRIAPGF PMSMPQTGKK
0501: LEADSSLKPA YVGVSMPKTD MNAAQDGHGA AVQGSFPVSL CTYVERNLSR CKDDAQRSAT QSIMKEMITK ATADGTLHTK NWDIEPLLAL PENAKGTNMT
0601: SNAKDSSPFS FSTSRRSPSR RTKSRWEPVA EEKVTNKVEV VSKEPAKSNA CTTWENTRRT GNTWNLGNFV QSRQPPTSQW NQRPSKKQRI GGNANLTKNG
0701: NASSDSDKEQ DLTKYYASSI ALTNSPEEKK RREHRSKRFE RGQGASSKST SSIPYKDGAA NVYTRGAISM LNNRSNGDGA SLAVEDIDWD ALTIKGTCQE
0801: IEKRYLRLTS APDPATVRPE DVLEKALHMV ETSEKNYLYK CDQLKSIRQD LTVQRIQNEL TVKVYETHAR LALQAGDLSE YNQCQSQLTR LYGEGIAGCH
0901: LEFSAYNLLC VMLHSNNKRD LLSSMASLSK EARLDETVKH ALAVHSAVSS GNYVMFFKLY KKAPGLNSCL MDLYVERMRF EAIKCMSKSY RPTVPVRYVT
1001: RVLGFTRVDV LCEANVADGL EECEEWLKAH GAVLAVDENS GELQIDTKVS SASLYMPEPD NAVSHGDASL AVDDFLARAS
0101: YSNSVQPAYN AAQYPNYYHN YPQPANDSSL HQGVDQSSGA AYQPLTSFPN SGSYVGPTSN TYYNAGADQT AQAYATNNYY YQNQAWSGGS SGDVHAQTYQ
0201: TYAPSDTNAA QSSCSLPTTS FHYPQQYNQW SNYYDQSAPN SGALAVAGNS ASDTKSPSAG SGYTYPSTQP PPPGTTQRKN DAVAPTAPPQ AVGITGFQSQ
0301: HVNQAPGAPG FQSQHVNQAP GAPGFQSQHV NQAPGAPGFQ SQHVNPAPGV QGFQSQYVNL SPDTPGFQSQ HVNPAPVTPG FQSQHLNQAP GNPGYENPYA
0401: NKTAAVSGFQ NHYINQAPAY QQNSTSHSQL PLSNQRDQQK ALHAQGPSSN VYSVNHVNEN SQPTLQGFAK TVASVNKVHI PTNPRIAPGF PMSMPQTGKK
0501: LEADSSLKPA YVGVSMPKTD MNAAQDGHGA AVQGSFPVSL CTYVERNLSR CKDDAQRSAT QSIMKEMITK ATADGTLHTK NWDIEPLLAL PENAKGTNMT
0601: SNAKDSSPFS FSTSRRSPSR RTKSRWEPVA EEKVTNKVEV VSKEPAKSNA CTTWENTRRT GNTWNLGNFV QSRQPPTSQW NQRPSKKQRI GGNANLTKNG
0701: NASSDSDKEQ DLTKYYASSI ALTNSPEEKK RREHRSKRFE RGQGASSKST SSIPYKDGAA NVYTRGAISM LNNRSNGDGA SLAVEDIDWD ALTIKGTCQE
0801: IEKRYLRLTS APDPATVRPE DVLEKALHMV ETSEKNYLYK CDQLKSIRQD LTVQRIQNEL TVKVYETHAR LALQAGDLSE YNQCQSQLTR LYGEGIAGCH
0901: LEFSAYNLLC VMLHSNNKRD LLSSMASLSK EARLDETVKH ALAVHSAVSS GNYVMFFKLY KKAPGLNSCL MDLYVERMRF EAIKCMSKSY RPTVPVRYVT
1001: RVLGFTRVDV LCEANVADGL EECEEWLKAH GAVLAVDENS GELQIDTKVS SASLYMPEPD NAVSHGDASL AVDDFLARAS
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.