Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G207800.1 | Wheat | cytosol | 99.76 | 99.76 |
| TraesCS5B01G200200.1 | Wheat | cytosol | 99.02 | 99.02 |
| HORVU5Hr1G059930.4 | Barley | cytosol | 98.04 | 98.04 |
| EER98853 | Sorghum | cytosol | 89.73 | 89.73 |
| Os09t0386400-01 | Rice | cytosol | 89.49 | 89.49 |
| Zm00001d020359_P003 | Maize | cytosol | 88.26 | 84.35 |
| GSMUA_Achr7P18480_001 | Banana | cytosol | 71.39 | 70.7 |
| VIT_11s0016g02290.t01 | Wine grape | cytosol | 69.68 | 69.01 |
| KRH02720 | Soybean | cytosol, nucleus | 69.44 | 68.77 |
| KRH19149 | Soybean | cytosol, nucleus | 68.22 | 68.05 |
| CDY66989 | Canola | cytosol | 58.92 | 66.94 |
| PGSC0003DMT400056705 | Potato | cytosol | 29.1 | 66.85 |
| CDY67021 | Canola | cytosol | 58.68 | 66.85 |
| Solyc07g039210.2.1 | Tomato | nucleus | 66.75 | 65.78 |
| PGSC0003DMT400034206 | Potato | cytosol | 66.5 | 65.54 |
| CDY35873 | Canola | cytosol | 66.01 | 65.38 |
| Bra040682.1-P | Field mustard | cytosol | 65.77 | 65.13 |
| AT2G19560.1 | Thale cress | cytosol | 64.06 | 63.44 |
| CDY13554 | Canola | cytosol | 24.94 | 58.96 |
| CDY13555 | Canola | cytosol, nucleus, vacuole | 15.16 | 32.29 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G201500.1 | EnsemblPlantsGene:TraesCS5A01G201500 | Gene3D:1.10.10.10 | Gene3D:1.25.40.570 | InterPro:IPR000717 | InterPro:IPR036388 |
| InterPro:PCI_dom | InterPro:WH-like_DNA-bd_sf | PANTHER:PTHR12732 | PANTHER:PTHR12732:SF0 | PFAM:PF01399 | PFscan:PS50250 |
| SEG:seg | MapMan:16.11.2.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:407935749..407940255
Molecular Weight (calculated)
46603.2 Da
IEP (calculated)
9.605
GRAVY (calculated)
-0.052
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYLSMGEA HRRIADYLSR LDDAISQSDG ADLASLLAIS SAPASTPLSD ALAAFPDFPR LASDRFPHLS DFLPPLLRAI HSHSLRRFGD AYSSFEKAAS
101: AFLQEFRNWE TPWAMEAMHM VALEIRLLAE KADRELVMSG KNPDKLQAAG SFLMKVFGAL AVKGPKRVGA LYVTCQLFKI YFRLGTVNLC RSVIRSIETA
201: RNFDFEDFPV KDKVTYMYYT GRLEVFNENF LVADQKLTYA LMHCNPQSES NLRKILKFLI PVKLSIGVLP RRTLLEKYNL LEYADIVTSL RRGDLRLLKQ
301: ALDRHEDQLL KCGVYLVLEK LELQVYRRLV KKIHIIQREK EPSKAHQIKL DVLVKTLQWL GITMDVDEVE CIMACLIYKN LIKGYFAHKS KVLVLSKQDP
401: FPKLNGKPV
101: AFLQEFRNWE TPWAMEAMHM VALEIRLLAE KADRELVMSG KNPDKLQAAG SFLMKVFGAL AVKGPKRVGA LYVTCQLFKI YFRLGTVNLC RSVIRSIETA
201: RNFDFEDFPV KDKVTYMYYT GRLEVFNENF LVADQKLTYA LMHCNPQSES NLRKILKFLI PVKLSIGVLP RRTLLEKYNL LEYADIVTSL RRGDLRLLKQ
301: ALDRHEDQLL KCGVYLVLEK LELQVYRRLV KKIHIIQREK EPSKAHQIKL DVLVKTLQWL GITMDVDEVE CIMACLIYKN LIKGYFAHKS KVLVLSKQDP
401: FPKLNGKPV
001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS
Arabidopsis Description
EER5Enhanced ethylene response protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.