Factsheet for TraesCSU01G087500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G110300.1	Wheat	cytosol	88.74	94.04
TraesCS6A01G120500.2	Wheat	cytosol	78.8	87.14
TraesCS1B01G006000.1	Wheat	mitochondrion	61.91	81.68
TraesCS1B01G006200.1	Wheat	cytosol	67.54	80.72
TraesCSU01G045200.2	Wheat	cytosol	62.1	63.9
TraesCSU01G030500.1	Wheat	cytosol	49.91	62.44
TraesCSU01G033300.1	Wheat	cytosol	52.72	57.82
TraesCSU01G032200.1	Wheat	peroxisome	51.78	57.5
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	48.59	56.92
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	48.22	56.48
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	46.9	55.07
Bra012970.1-P	Field mustard	cytosol	45.97	54.81
TraesCSU01G033200.1	Wheat	cytosol	27.2	54.51
Bra012971.1-P	Field mustard	cytosol	46.9	54.35
CDY02158	Canola	cytosol	40.71	54.11
CDY23072	Canola	cytosol	40.71	54.11
CDY23071	Canola	cytosol	46.9	54.11
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	46.53	54.03
CDY02157	Canola	cytosol	46.72	53.9
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	45.78	53.86
CDY40773	Canola	mitochondrion	46.34	53.81
Bra028683.1-P	Field mustard	mitochondrion	46.15	53.59
AT5G07800.1	Thale cress	cytosol	46.15	53.48
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	45.4	53.42
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	45.78	52.93
AT5G61290.1	Thale cress	cytosol	45.59	52.71
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.32	48.25
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	46.72	23.36

Protein Annotations

EnsemblPlants:TraesCSU01G087500.1	EnsemblPlantsGene:TraesCSU01G087500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004499
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	InterPro:IPR036188	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86
PFAM:PF00743	PRINTS:PR00370	SEG:seg	SUPFAM:SSF51905	MapMan:35.1	:

Description

No Description!

Coordinates

chrUn:-:78167374..78170009

Molecular Weight (calculated)

59673.0 Da

IEP (calculated)

5.112

GRAVY (calculated)

-0.210

Length

533 amino acids

Sequence
(BLAST)

001: MKIDMVCDDD IKPLQRQKVC VIGAGMAGLA SARELRREGH DVTVLEQSGD VGGQWRYDPM TDGADPLGAA AAPVKVHGSM YASLRLISAR ETMGFTDFQF
101: APKDGRDGRR FPGHREVYLY LKDFCDAFGL MEFVRLNTSV VRVFLAPGPT RQWTVRSVDL GKSEEVEEAF DAVMVANGHY SQPRLPSIEG MEVWRGRQMH
201: SHSYRVPEPF RDEVVVVVGC GASGKDIAME VRRVAKEVHL VAKSMEEVAQ ELAKVLSKYS ASLHLQPHVR TSVFCFPGSS HVDLQFSTWM QNEMIDPTTR
301: QVERLCEDGR VVFGDGSTIL ADTIIYCTGF NYCFPFLDTE GAVTVDDNCV GPLFEHVFPP SLAPSLSFVG IPVKVFAPWF FEAQAKWVAQ VLSGKRTLPP
401: EVEMMRSVEE YYRAREAAGA PKNYTHDVSL FDTTALTTTH NLHDNRTLFM DEFGSKYCDF PGVEKWRYEL LVSSLVNMFD NLETFRDEYQ DSDSIRKGVE
501: EWHLSAQQAQ AAVVAVAPAA TKEQLLGLLE KVE

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.