Factsheet for TraesCSU01G032200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G522900.1	Wheat	cytosol	88.96	85.92
TraesCSU01G030500.1	Wheat	cytosol	74.38	83.8
HORVU4Hr1G089360.1	Barley	cytosol	83.96	79.02
TraesCSU01G033300.1	Wheat	cytosol	77.5	76.54
TraesCSU01G033200.1	Wheat	cytosol	39.79	71.8
Os07t0112100-00	Rice	cytosol	62.92	59.22
TraesCS7D01G425900.1	Wheat	cytosol	58.75	57.91
Os02t0580600-01	Rice	cytosol	53.33	54.58
TraesCSU01G045200.2	Wheat	cytosol	57.92	53.67
TraesCSU01G087500.1	Wheat	cytosol	57.5	51.78
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	47.29	49.89
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	47.29	49.89
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	46.04	48.68
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	45.62	48.34
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	45.21	47.9
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	45.62	47.71
Bra012970.1-P	Field mustard	cytosol	44.38	47.65
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	45.42	47.29
CDY40773	Canola	mitochondrion	45.21	47.28
Bra012971.1-P	Field mustard	cytosol	45.21	47.17
CDY23071	Canola	cytosol	45.21	46.97
AT5G61290.1	Thale cress	cytosol	45.0	46.85
Bra028683.1-P	Field mustard	mitochondrion	44.79	46.84
CDY02157	Canola	cytosol	45.0	46.75
AT5G07800.1	Thale cress	cytosol	44.79	46.74
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.83	45.61
CDY02158	Canola	cytosol	37.92	45.39
CDY23072	Canola	cytosol	37.5	44.89
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	47.71	21.48

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCSU01G032200	EnsemblPlants:TraesCSU01G032200.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:29651118..29652560

Molecular Weight (calculated)

52562.5 Da

IEP (calculated)

4.830

GRAVY (calculated)

-0.088

Length

480 amino acids

Sequence
(BLAST)

001: MAAGAGEPVL PSKGVCVVGG GMAGLAAARE LRREGHAVTV MEQSGDVGGQ WLYDHRTDAE DPLGATAPVR VPSSIYACLR LISPREAMGF SDFQFFPTDG
101: EGRDPRRFPV HGELHCYLRD FCDAFGLMDT VRLNTRVLRV APAPTSSRWA VRSVRLLGTT EDDDVAQEEE EVFDAVVVAT GHYSQPMLPT DIEGMGEWTR
201: RQLHSHSYRT PEPFLGEAVV IVGCGNSGND IALDLCRVAR EVHLAASSEA TAATPAMSRV LMLANHGDVL RLHAWIRRLQ ADGRVEFADG SSVVADTVIY
301: CTGYTYSFPF LDTAGAVTID SDGYVVGPLF EHVFPLSLAP SLSFVGVAKK VLIPWFFEVA ARWMAQVLSG RRALPAEEEM LRSVEEHLRA REAAGIESQK
401: MYEFGEKYSD LAPLEEWKKE LLMSSIASMM ADVETFRDRA YDDSEIVRKG LRGWLDLAAQ AQAKSMAVAV DVEAERACHG

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.