Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS5A01G201500.1 | |
| TraesCS5B01G200200.1 | |
| TraesCS5D01G207800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61290.1 | TraesCS5A01G201500.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5B01G200200.1 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | TraesCS5D01G207800.1 | AT2G19560.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G530900.1 | Wheat | cytosol | 89.3 | 83.78 |
| TraesCSU01G030500.1 | Wheat | cytosol | 72.63 | 82.86 |
| TraesCSU01G032200.1 | Wheat | peroxisome | 76.54 | 77.5 |
| TraesCSU01G033200.1 | Wheat | cytosol | 42.18 | 77.07 |
| Os07t0112100-00 | Rice | cytosol | 61.93 | 59.02 |
| TraesCS7D01G425900.1 | Wheat | cytosol | 58.64 | 58.52 |
| Os02t0580600-01 | Rice | cytosol | 52.88 | 54.8 |
| TraesCSU01G045200.2 | Wheat | cytosol | 57.61 | 54.05 |
| TraesCSU01G087500.1 | Wheat | cytosol | 57.82 | 52.72 |
| Solyc03g115560.2.1 | Tomato | cytosol, peroxisome, plastid | 47.74 | 50.99 |
| PGSC0003DMT400063125 | Potato | cytosol, peroxisome, plastid | 47.53 | 50.77 |
| CDX99030 | Canola | cytosol, mitochondrion, peroxisome, plastid | 46.5 | 49.89 |
| CDX69991 | Canola | cytosol, mitochondrion, peroxisome, plastid | 46.3 | 49.67 |
| CDY14028 | Canola | cytosol, mitochondrion, peroxisome, plastid | 46.71 | 49.46 |
| VIT_17s0000g06790.t01 | Wine grape | cytosol, peroxisome, plastid | 45.88 | 49.12 |
| Bra009308.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 46.5 | 49.02 |
| CDY40773 | Canola | mitochondrion | 46.3 | 49.02 |
| Bra028683.1-P | Field mustard | mitochondrion | 45.88 | 48.58 |
| Bra012970.1-P | Field mustard | cytosol | 44.65 | 48.55 |
| AT5G07800.1 | Thale cress | cytosol | 45.68 | 48.26 |
| AT5G61290.1 | Thale cress | cytosol | 45.68 | 48.16 |
| Bra012971.1-P | Field mustard | cytosol | 45.47 | 48.04 |
| CDY23071 | Canola | cytosol | 45.27 | 47.62 |
| CDY02157 | Canola | cytosol | 45.27 | 47.62 |
| CDY02158 | Canola | cytosol | 38.48 | 46.63 |
| CDY23072 | Canola | cytosol | 38.07 | 46.13 |
| KRH55196 | Soybean | cytosol, mitochondrion, peroxisome | 10.7 | 45.61 |
| VIT_17s0000g06780.t01 | Wine grape | cytosol, peroxisome, plastid | 47.94 | 21.86 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004499 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR036188 | PFAM:PF00743 | PIRSF:PIRSF000332 |
| PRINTS:PR00370 | PANTHER:PTHR23023 | PANTHER:PTHR23023:SF86 | SUPFAM:SSF51905 | EnsemblPlantsGene:TraesCSU01G033300 | EnsemblPlants:TraesCSU01G033300.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:29850617..29852468
Molecular Weight (calculated)
53646.6 Da
IEP (calculated)
5.765
GRAVY (calculated)
-0.293
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIGDGEPVL QFKSVCVVGG GMAGLAVARE LRREGHTVTV MEQSGDVGGQ WLYDRRTDVE DPMGAVAPVR VPSSIYACLR LISPREVMGC SDFQFLPREG
101: AGRDPRRYPG HRELHCYLRD FCHVFGIMET VRLNTRVLRV APAAMSMSTT TRRWAVRSVR RLGGTEDDDG ALEDEEVFDA VVVATGNYAQ PMLPNDIQGM
201: DEWRRRQLHS HSYRTPEPFH GEAVVVVGCG ASGKDIALDL GRVAREAHLA ASSEAEATTP AMSRMLANHG DVLRLHPRVR QLRADGQVEF ADGSSVVADT
301: VIYCTGYAYS FPFLDTGGAV TVSDGGYVVG PLFEHVFTPS LAPSLSFVGV PRKVLIPWFF EVQARWVAQV LSGRHALPSE EQMLRSVEEQ LRAREAAGVP
401: RKHTHNIASV EPRDMYEFGG KYCDFTPTEE WKKELILSSN ASMDDDVETF RNRADGDSEN VRKGRQGWLG GLVAQAQEET AVKTEF
101: AGRDPRRYPG HRELHCYLRD FCHVFGIMET VRLNTRVLRV APAAMSMSTT TRRWAVRSVR RLGGTEDDDG ALEDEEVFDA VVVATGNYAQ PMLPNDIQGM
201: DEWRRRQLHS HSYRTPEPFH GEAVVVVGCG ASGKDIALDL GRVAREAHLA ASSEAEATTP AMSRMLANHG DVLRLHPRVR QLRADGQVEF ADGSSVVADT
301: VIYCTGYAYS FPFLDTGGAV TVSDGGYVVG PLFEHVFTPS LAPSLSFVGV PRKVLIPWFF EVQARWVAQV LSGRHALPSE EQMLRSVEEQ LRAREAAGVP
401: RKHTHNIASV EPRDMYEFGG KYCDFTPTEE WKKELILSSN ASMDDDVETF RNRADGDSEN VRKGRQGWLG GLVAQAQEET AVKTEF
001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQV SSSYSE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQV SSSYSE
Arabidopsis Description
FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.