Factsheet for TraesCS7D01G425900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G030500.1	Wheat	cytosol	56.26	64.32
TraesCS4D01G269000.1	Wheat	cytosol	63.86	62.58
TraesCS5B01G194300.1	Wheat	cytosol	60.99	62.53
TraesCS6D01G110500.1	Wheat	cytosol	60.16	61.43
TraesCS5B01G531000.1	Wheat	cytosol	60.57	59.6
TraesCS5A01G522900.1	Wheat	cytosol	60.16	58.95
TraesCSU01G032200.1	Wheat	peroxisome	57.91	58.75
TraesCSU01G033300.1	Wheat	cytosol	58.52	58.64
Os07t0112100-00	Rice	cytosol	61.4	58.63
TraesCS5A01G298300.1	Wheat	cytosol	58.52	58.04
TraesCS6D01G110300.1	Wheat	cytosol	59.55	57.65
TraesCSU01G033200.1	Wheat	cytosol	31.01	56.77
TraesCS3D01G000800.1	Wheat	cytosol	59.75	56.4
HORVU4Hr1G089360.1	Barley	cytosol	58.32	55.69
TraesCS5B01G530900.1	Wheat	cytosol	59.14	55.6
TraesCS5B01G297400.1	Wheat	cytosol	51.95	54.76
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	50.51	54.07
Os02t0580600-01	Rice	cytosol	51.95	53.94
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	50.1	53.63
HORVU5Hr1G078450.1	Barley	cytosol	30.6	53.21
Bra012971.1-P	Field mustard	cytosol	49.9	52.83
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	48.87	52.42
Bra012970.1-P	Field mustard	cytosol	47.84	52.13
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	48.25	51.88
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	48.05	51.66
AT5G61290.1	Thale cress	cytosol	48.87	51.63
CDY02158	Canola	cytosol	42.51	51.62
CDY23072	Canola	cytosol	42.09	51.12
AT5G07800.1	Thale cress	cytosol	48.25	51.09
CDY23071	Canola	cytosol	48.46	51.08
CDY02157	Canola	cytosol	48.46	51.08
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	48.05	50.98
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	48.25	50.98
CDY40773	Canola	mitochondrion	47.64	50.54
Bra028683.1-P	Field mustard	mitochondrion	47.43	50.33
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.88	46.49
TraesCS4D01G360800.1	Wheat	cytosol	28.95	44.34
TraesCS4D01G361000.1	Wheat	cytosol	40.25	42.52
TraesCS6D01G139800.1	Wheat	mitochondrion	39.22	42.44
TraesCS4D01G360900.1	Wheat	cytosol	39.84	40.17
TraesCS1D01G213900.2	Wheat	peroxisome	40.04	39.31
TraesCS1D01G214400.1	Wheat	peroxisome	32.85	31.43
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	50.1	22.89

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS7D01G425900	EnsemblPlants:TraesCS7D01G425900.1	SEG:seg

Description

No Description!

Coordinates

chr7D:+:546048017..546049566

Molecular Weight (calculated)

53653.1 Da

IEP (calculated)

5.177

GRAVY (calculated)

-0.290

Length

487 amino acids

Sequence
(BLAST)

001: MATHSPQPTS KKVCIVGAGM AGLAAVRELR REGHAVTVLE QSHDVGGQWL YDPRTDDADP LGAAAPVRVH SSMYDSLRLM SPREAMGFSD FPFASRDGAG
101: AGCDPRRFPG HREVYCYLKD FCDAFGLVDA IRLNTRAVRI ALAPPCDVGS SLRWQVRAVQ VEPESNKEVS YTEEVFDAVV VATGHYSQPK LPSIDGMEQW
201: RRTQLHSHSY RTPGPFCGET VVVVGCGESG TDIAVELTGV AREVHLAARS MEVVSPGLSK AIARHDNLHL HLGVERLRED GAVVFADGSS AVADTVIYCT
301: GYSYSFPFLE TEGRVTVDDN RVDPLFEHVF PASPLAPSLS FVGIPIRVIA PWFFEGQARW VARVLSGRSE LPTEAEMVRS VEAQRRAREA AGVPNKLAHD
401: ICGVEPHQYM SEFGERWCGF PRLESWKIEL FASSVKNMAA NFETFRDEYE DSDTVREALK EWRRSSGVGA RHPEEEEDAD AAEAMPP

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.