Factsheet for TraesCS4D01G360800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G370500.1	Wheat	mitochondrion	94.03	67.34
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	23.58	60.98
HORVU6Hr1G094480.7	Barley	plastid	65.41	57.94
KXG40414	Sorghum	cytosol	61.32	50.65
TraesCS4D01G361000.1	Wheat	cytosol	73.27	50.54
Zm00001d027286_P001	Maize	cytosol	59.75	49.61
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	18.55	48.76
TraesCS4D01G360900.1	Wheat	cytosol	73.27	48.24
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	52.52	45.88
TraesCS6D01G139800.1	Wheat	mitochondrion	62.26	44.0
CDY72131	Canola	cytosol	40.57	43.88
CDX98082	Canola	cytosol	40.57	43.73
CDY31817	Canola	cytosol	35.53	43.46
VIT_18s0075g00690.t01	Wine grape	cytosol	13.84	43.14
GSMUA_Achr2P18520_001	Banana	cytosol	50.31	42.11
GSMUA_Achr11P...	Banana	plastid	55.03	40.89
CDY03270	Canola	cytosol	45.6	40.62
CDX98777	Canola	cytosol, peroxisome, plasma membrane	34.91	39.78
VIT_02s0154g00190.t01	Wine grape	cytosol	55.03	38.29
Bra019747.1-P	Field mustard	cytosol	55.66	38.15
AT1G12140.1	Thale cress	mitochondrion	54.4	37.69
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	51.89	37.67
VIT_00s0233g00180.t01	Wine grape	cytosol	54.09	37.64
VIT_00s0233g00170.t01	Wine grape	cytosol	29.56	37.6
CDY15973	Canola	plastid	54.72	37.5
CDY21037	Canola	plastid	52.83	37.5
CDY31244	Canola	plastid	52.83	37.5
CDY26543	Canola	plastid	54.4	37.28
Bra026986.1-P	Field mustard	plastid	54.4	37.28
Bra026988.1-P	Field mustard	plastid	53.77	37.25
CDY26541	Canola	plastid	53.77	37.25
CDY68139	Canola	mitochondrion	52.52	37.19
CDY31816	Canola	plastid	52.2	37.05
CDY15969	Canola	plastid	53.46	37.04
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	52.83	36.92
AT1G62620.1	Thale cress	cytosol	52.2	36.89
AT1G12200.1	Thale cress	cytosol	53.77	36.77
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	52.52	36.7
TraesCS1D01G213900.2	Wheat	peroxisome	57.23	36.69
AT1G63370.1	Thale cress	plastid	51.89	36.67
AT1G12130.1	Thale cress	plastid	53.77	36.38
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	51.57	35.96
TraesCS5A01G536300.1	Wheat	cytosol	10.06	35.96
VIT_02s0154g00170.t01	Wine grape	vacuole	50.94	35.92
AT1G12160.1	Thale cress	cytosol, mitochondrion	52.83	35.9
AT1G62600.1	Thale cress	mitochondrion, plastid	50.63	35.62
Bra016787.1-P	Field mustard	plastid	52.83	35.37
CDY68140	Canola	plastid	46.86	35.31
Bra027032.1-P	Field mustard	cytosol	46.86	35.31
Bra036655.1-P	Field mustard	plastid	11.32	35.29
KRH28040	Soybean	peroxisome, plastid	50.63	35.23
CDY12955	Canola	extracellular, plastid	51.26	35.21
Bra027035.1-P	Field mustard	plastid	50.94	35.14
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	50.31	34.86
Solyc06g060610.2.1	Tomato	mitochondrion	52.2	34.8
AT1G62570.1	Thale cress	cytosol	50.31	34.71
CDY31813	Canola	plastid	49.69	34.27
AT1G63340.1	Thale cress	plastid	44.97	33.73
AT1G62560.1	Thale cress	plastid	48.43	33.33
CDY39802	Canola	plastid	13.21	33.07
AT1G62580.1	Thale cress	cytosol, plastid	51.26	32.8
VIT_00s0233g00130.t01	Wine grape	plastid	21.7	32.7
CDY27695	Canola	plastid	24.53	32.37
AT1G62540.2	Thale cress	cytosol	49.06	32.37
TraesCS6D01G110500.1	Wheat	cytosol	46.54	31.03
TraesCS4D01G269000.1	Wheat	cytosol	45.6	29.18
TraesCS7D01G425900.1	Wheat	cytosol	44.34	28.95
TraesCS6D01G110300.1	Wheat	cytosol	45.6	28.83
TraesCS3D01G000800.1	Wheat	cytosol	44.03	27.13
TraesCS1D01G214400.1	Wheat	peroxisome	38.99	24.36
AT1G63390.1	Thale cress	mitochondrion	10.06	19.05

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF199	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS4D01G360800	EnsemblPlants:TraesCS4D01G360800.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:507680102..507683734

Molecular Weight (calculated)

35340.7 Da

IEP (calculated)

5.692

GRAVY (calculated)

-0.189

Length

318 amino acids

Sequence
(BLAST)

001: MGFLDFPFVA GTEGDPRRFP GHGEVLRYLE AFARRFDLHG LVRLQTEVVS VRRRVDGAGA AGWSVSYCST KLASVGNEVE EEVFDAVVVC NGHFTEPRLA
101: DIAGIDGWPG KQMHSHSYRV PDPFHGQVVV VVGYRSSGFD ISREIAGVAR EVHVADRSLP SADSTCETAR CDNLSFHPVI ERAEEDGGVV FQDGTRVKAD
201: VIIHCAGRYK YNYPFLSDDH SVISVDDNRV GPLYKHVFPP HLAPHILFIG LPFKGILFSM FQLQSNWVAG VLSGRIELPS QEEMMRDVAL FYSELEARGC
301: PKRYTHDLGG GTTYEYDD

Best Arabidopsis Sequence Match ( AT1G12130.1 )
(BLAST)

001: MTPPPNSISS RNVAVIGAGA AGLVAARELR REGHTVTIFE RQKQVGGLWV CTPNVEPDLL SIDPDRTVVH SSVYQSLRTN LPRECMGYSD FPFVTRPDDE
101: SRDPRRYPDH REVMRYLQDF AKEFKIEEMI RFETEVFRVE PTAENSCKWR VQFRSSSGVS GEDIFDAVVI CNGHFTEPRL AHIPGIESWP GKQIHSHNYR
201: VSDPFKGQVV IVIGYQSSGS DISRDIAILA KEVHIAAKSD AYAKESSIYS NLHFHPTIDR VYEDGSVVFQ DGKLIFADAI VHCTGYKYCF PFLETKGYVN
301: VEDNRVGPLY KHVFPPALAP GLSFIGLPSM ALQFFMFEIQ SRWVASVLSG RVKLPSEEQM MEDVIAFYAK LKSLGIPKRF THFLTDPQWT PMFEKLKPHE
401: AVLISQSEYF NWIAEQCGCS SIERWREEQY NIAIKKDDDN FRDEWDDDDQ IIQEAYRDFA KFKPSKVWST

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.