Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G12130.1 | Thale cress | plastid | 74.36 | 74.04 |
| AT1G12140.1 | Thale cress | mitochondrion | 61.54 | 62.75 |
| AT1G65860.1 | Thale cress | cytosol, extracellular, plastid | 59.83 | 61.0 |
| AT1G12200.1 | Thale cress | cytosol | 60.47 | 60.86 |
| AT1G62570.1 | Thale cress | cytosol | 59.83 | 60.74 |
| AT1G62560.1 | Thale cress | plastid | 59.19 | 59.96 |
| AT1G63390.1 | Thale cress | mitochondrion | 21.15 | 58.93 |
| AT1G63340.1 | Thale cress | plastid | 52.99 | 58.49 |
| VIT_00s0233g00120.t01 | Wine grape | cytosol, peroxisome, vacuole | 15.17 | 57.72 |
| AT1G62600.1 | Thale cress | mitochondrion, plastid | 55.56 | 57.52 |
| AT1G62540.2 | Thale cress | cytosol | 59.19 | 57.47 |
| AT1G62620.1 | Thale cress | cytosol | 54.91 | 57.11 |
| AT1G63370.1 | Thale cress | plastid | 54.49 | 56.67 |
| VIT_00s0233g00130.t01 | Wine grape | plastid | 25.43 | 56.4 |
| VIT_02s0154g00190.t01 | Wine grape | cytosol | 53.85 | 55.14 |
| AT1G62580.1 | Thale cress | cytosol, plastid | 57.91 | 54.53 |
| VIT_00s0233g00180.t01 | Wine grape | cytosol | 52.99 | 54.27 |
| KRH28040 | Soybean | peroxisome, plastid | 52.56 | 53.83 |
| EER91959 | Sorghum | mitochondrion | 50.85 | 53.48 |
| Zm00001d029865_P001 | Maize | mitochondrion | 50.21 | 53.41 |
| GSMUA_Achr11P... | Banana | plastid | 48.72 | 53.27 |
| TraesCS4D01G360800.1 | Wheat | cytosol | 35.9 | 52.83 |
| PGSC0003DMT400035866 | Potato | cytosol, peroxisome, plastid | 51.28 | 52.75 |
| VIT_02s0154g00180.t01 | Wine grape | cytosol, peroxisome, vacuole | 50.85 | 52.31 |
| TraesCS5A01G536600.1 | Wheat | cytosol, peroxisome, plastid | 36.97 | 52.27 |
| TraesCS4B01G370500.1 | Wheat | mitochondrion | 49.15 | 51.8 |
| PGSC0003DMT400043245 | Potato | cytosol, peroxisome, plastid | 50.21 | 51.54 |
| HORVU4Hr1G087900.7 | Barley | cytosol, peroxisome | 42.52 | 51.29 |
| VIT_02s0154g00170.t01 | Wine grape | vacuole | 49.36 | 51.22 |
| Solyc06g060610.2.1 | Tomato | mitochondrion | 52.14 | 51.15 |
| TraesCS4D01G361000.1 | Wheat | cytosol | 49.57 | 50.33 |
| TraesCS4B01G370200.1 | Wheat | mitochondrion | 49.79 | 50.32 |
| VIT_02s0154g00160.t01 | Wine grape | cytosol, peroxisome | 47.01 | 50.23 |
| HORVU1Hr1G091130.12 | Barley | cytosol, mitochondrion, peroxisome, plastid | 50.21 | 49.89 |
| TraesCS4B01G366800.1 | Wheat | plastid | 49.79 | 49.89 |
| TraesCS6A01G150100.1 | Wheat | mitochondrion | 19.44 | 49.73 |
| OQU92170 | Sorghum | cytosol | 38.89 | 49.32 |
| TraesCS5A01G534500.1 | Wheat | cytosol | 49.36 | 49.04 |
| TraesCS1A01G210600.1 | Wheat | cytosol | 38.03 | 49.04 |
| TraesCS4B01G370400.1 | Wheat | mitochondrion | 49.15 | 48.73 |
| HORVU6Hr1G061340.1 | Barley | mitochondrion | 20.09 | 48.45 |
| VIT_18s0075g00690.t01 | Wine grape | cytosol | 10.47 | 48.04 |
| TraesCS6D01G139800.1 | Wheat | mitochondrion | 45.94 | 47.78 |
| HORVU6Hr1G029800.7 | Barley | mitochondrion | 42.09 | 47.58 |
| TraesCS4D01G360900.1 | Wheat | cytosol | 48.93 | 47.41 |
| Os10t0553800-01 | Rice | peroxisome | 48.72 | 47.3 |
| GSMUA_Achr2P18520_001 | Banana | cytosol | 38.25 | 47.11 |
| HORVU4Hr1G031220.3 | Barley | mitochondrion, peroxisome | 26.07 | 46.39 |
| VIT_00s0233g00170.t01 | Wine grape | cytosol | 24.57 | 46.0 |
| KXG40414 | Sorghum | cytosol | 37.82 | 45.97 |
| Zm00001d027286_P001 | Maize | cytosol | 37.61 | 45.95 |
| HORVU1Hr1G053900.1 | Barley | cytosol, peroxisome | 47.65 | 45.79 |
| TraesCS1B01G224600.2 | Wheat | cytosol | 47.65 | 44.87 |
| HORVU2Hr1G026400.29 | Barley | cytosol | 13.03 | 44.53 |
| TraesCS1D01G213900.2 | Wheat | peroxisome | 46.79 | 44.15 |
| TraesCS5A01G536300.1 | Wheat | cytosol | 8.33 | 43.82 |
| HORVU6Hr1G094480.7 | Barley | plastid | 33.33 | 43.45 |
| TraesCS5A01G536500.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 48.72 | 42.78 |
| Zm00001d046637_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 10.9 | 42.15 |
| AT5G07800.1 | Thale cress | cytosol | 41.24 | 41.96 |
| AT5G61290.1 | Thale cress | cytosol | 41.03 | 41.65 |
| HORVU7Hr1G027520.8 | Barley | endoplasmic reticulum, extracellular, golgi | 27.35 | 40.89 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | EntrezGene:837768 | ProteinID:AAG12577.1 | ProteinID:AEE28844.1 | ArrayExpress:AT1G12160 |
| EnsemblPlantsGene:AT1G12160 | RefSeq:AT1G12160 | TAIR:AT1G12160 | RefSeq:AT1G12160-TAIR-G | EnsemblPlants:AT1G12160.1 | TAIR:AT1G12160.1 |
| Unigene:At.16223 | EMBL:BT030389 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0004499 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009753 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019748 | GO:GO:0019761 | GO:GO:0050660 | GO:GO:0050661 |
| GO:GO:0055114 | InterPro:IPR036188 | RefSeq:NP_172680.1 | PFAM:PF00743 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000191 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00370 | PANTHER:PTHR23023 | PANTHER:PTHR23023:SF198 | UniProt:Q9FWW6 |
| SUPFAM:SSF51905 | UniParc:UPI00000AA3BE | SEG:seg | : | : | : |
Description
Flavin-containing monooxygenase FMO GS-OX-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW6]
Coordinates
chr1:+:4125990..4128310
Molecular Weight (calculated)
53274.3 Da
IEP (calculated)
6.676
GRAVY (calculated)
-0.321
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVITSRAR HVAVIGLGAA GLVAVRELRR EGHTVIGFER EKHVGGLWVY TDRVDSDSVS VDPDRTIVHS SIYQSLRTNL PRECMGYSDF PFVTRSSDGD
101: PRRYPDHREV LMYLQDFAKE FKIEDMIRFE TEVLCVEPSP ENNRKWRVQF KSSNGVSGEE IFDAVVVCNG HFTEPRLAHI PGIESWPGKQ IHSHNYRIPD
201: PFKDEVVIVI GSQASGNDIS TDIATIAKEV HISSKMVASD SYGCYDNLRI HPTIYRARED GSVVFRNGKV VFADAIVHCT GYKYHFPFLK TSGYVTVEDN
301: RVGPLYKHVF PPALAPGISF IGLPFMGLQF FMFEIQSKWV ASVLSGRVKL PAEDKMMEEA VAFYSKLEDL GIPKRYTHFL TDPRGNPMLG TFKPEDAVVI
401: SQSDYFNWIA KQCGCTSIER WRERLYNVAI KKVFFGGDSY RDRWDDDQLI EEVYREFAKL KPNQDCSS
101: PRRYPDHREV LMYLQDFAKE FKIEDMIRFE TEVLCVEPSP ENNRKWRVQF KSSNGVSGEE IFDAVVVCNG HFTEPRLAHI PGIESWPGKQ IHSHNYRIPD
201: PFKDEVVIVI GSQASGNDIS TDIATIAKEV HISSKMVASD SYGCYDNLRI HPTIYRARED GSVVFRNGKV VFADAIVHCT GYKYHFPFLK TSGYVTVEDN
301: RVGPLYKHVF PPALAPGISF IGLPFMGLQF FMFEIQSKWV ASVLSGRVKL PAEDKMMEEA VAFYSKLEDL GIPKRYTHFL TDPRGNPMLG TFKPEDAVVI
401: SQSDYFNWIA KQCGCTSIER WRERLYNVAI KKVFFGGDSY RDRWDDDQLI EEVYREFAKL KPNQDCSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.