Factsheet for Solyc06g060610.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	91.61	96.04
Solyc06g062310.2.1	Tomato	cytosol	33.12	81.44
Solyc06g062320.1.1	Tomato	cytosol	19.71	71.76
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	17.61	68.29
Bra036655.1-P	Field mustard	plastid	13.84	64.71
VIT_02s0154g00190.t01	Wine grape	cytosol	61.64	64.33
VIT_00s0233g00180.t01	Wine grape	cytosol	61.22	63.9
VIT_00s0233g00130.t01	Wine grape	plastid	28.09	63.51
CDY31816	Canola	plastid	58.28	62.05
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	47.17	61.81
AT1G62600.1	Thale cress	mitochondrion, plastid	58.49	61.73
CDY68139	Canola	mitochondrion	58.07	61.69
KRH28040	Soybean	peroxisome, plastid	58.91	61.49
Zm00001d029865_P001	Maize	mitochondrion	56.18	60.91
AT1G62620.1	Thale cress	cytosol	57.44	60.89
GSMUA_Achr11P...	Banana	plastid	54.51	60.75
AT1G63370.1	Thale cress	plastid	57.23	60.67
EER91959	Sorghum	mitochondrion	56.39	60.45
TraesCS1A01G210600.1	Wheat	cytosol	45.91	60.33
VIT_02s0154g00170.t01	Wine grape	vacuole	57.02	60.31
CDY31817	Canola	cytosol	32.7	60.0
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	57.02	59.78
CDY39802	Canola	plastid	15.72	59.06
Bra027032.1-P	Field mustard	cytosol	52.2	59.0
CDY68140	Canola	plastid	52.2	59.0
CDY31244	Canola	plastid	54.72	58.26
CDY21037	Canola	plastid	54.51	58.04
OQU92170	Sorghum	cytosol	44.86	57.99
Bra026986.1-P	Field mustard	plastid	56.39	57.97
CDY26543	Canola	plastid	56.39	57.97
AT1G12200.1	Thale cress	cytosol	56.39	57.85
CDY15973	Canola	plastid	56.18	57.76
AT1G12140.1	Thale cress	mitochondrion	55.35	57.52
CDX98082	Canola	cytosol	35.43	57.29
CDY72131	Canola	cytosol	35.22	57.14
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	52.41	57.08
CDY03270	Canola	cytosol	42.56	56.86
AT1G63340.1	Thale cress	plastid	50.52	56.84
Bra019747.1-P	Field mustard	cytosol	55.14	56.68
Bra026988.1-P	Field mustard	plastid	54.3	56.43
VIT_00s0233g00170.t01	Wine grape	cytosol	29.56	56.4
CDY15969	Canola	plastid	54.09	56.21
Os10t0553800-01	Rice	peroxisome	56.6	56.02
CDY26541	Canola	plastid	53.88	55.99
CDX98777	Canola	cytosol, peroxisome, plasma membrane	32.7	55.91
Bra027035.1-P	Field mustard	plastid	53.67	55.53
HORVU1Hr1G053900.1	Barley	cytosol, peroxisome	56.39	55.24
HORVU4Hr1G031220.3	Barley	mitochondrion, peroxisome	30.4	55.13
CDY31813	Canola	plastid	53.25	55.1
CDY12955	Canola	extracellular, plastid	53.46	55.08
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	38.16	54.98
AT1G62570.1	Thale cress	cytosol	53.04	54.88
Solyc05g050920.2.1	Tomato	cytosol	48.43	54.74
Bra016787.1-P	Field mustard	plastid	54.51	54.74
GSMUA_Achr2P18520_001	Banana	cytosol	43.19	54.21
AT1G62580.1	Thale cress	cytosol, plastid	56.18	53.92
VIT_18s0075g00690.t01	Wine grape	cytosol	11.53	53.92
TraesCS1D01G213900.2	Wheat	peroxisome	55.97	53.83
TraesCS4D01G361000.1	Wheat	cytosol	51.99	53.8
Solyc05g050910.2.1	Tomato	cytosol, nucleus, peroxisome	48.85	53.69
CDY27695	Canola	plastid	27.04	53.53
TraesCS1B01G224600.2	Wheat	cytosol	55.77	53.52
HORVU1Hr1G091130.12	Barley	cytosol, mitochondrion, peroxisome, plastid	52.83	53.5
AT1G62560.1	Thale cress	plastid	51.78	53.46
TraesCS4B01G370200.1	Wheat	mitochondrion	51.78	53.35
AT1G12130.1	Thale cress	plastid	52.41	53.19
HORVU4Hr1G087900.7	Barley	cytosol, peroxisome	43.19	53.09
AT1G63390.1	Thale cress	mitochondrion	18.66	52.98
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	50.94	52.94
TraesCS4B01G370500.1	Wheat	mitochondrion	49.27	52.93
TraesCS4D01G360800.1	Wheat	cytosol	34.8	52.2
AT1G12160.1	Thale cress	cytosol, mitochondrion	51.15	52.14
TraesCS4B01G370400.1	Wheat	mitochondrion	51.57	52.12
TraesCS4B01G366800.1	Wheat	plastid	50.94	52.03
TraesCS4D01G360900.1	Wheat	cytosol	52.41	51.76
Zm00001d027286_P001	Maize	cytosol	41.51	51.7
TraesCS6D01G139800.1	Wheat	mitochondrion	48.64	51.56
KXG40414	Sorghum	cytosol	41.51	51.43
AT1G62540.2	Thale cress	cytosol	51.78	51.24
TraesCS5A01G534500.1	Wheat	cytosol	50.1	50.74
HORVU6Hr1G029800.7	Barley	mitochondrion	43.82	50.48
HORVU7Hr1G027520.8	Barley	endoplasmic reticulum, extracellular, golgi	33.12	50.48
TraesCS5A01G536300.1	Wheat	cytosol	9.22	49.44
TraesCS6A01G150100.1	Wheat	mitochondrion	18.45	48.09
HORVU6Hr1G061340.1	Barley	mitochondrion	19.29	47.42
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	51.15	45.78
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	43.19	45.27
HORVU6Hr1G094480.7	Barley	plastid	33.12	44.01
HORVU2Hr1G026400.29	Barley	cytosol	12.16	42.34
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	10.27	40.5

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188
UniProt:K4C6P1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF195
SUPFAM:SSF51905	EnsemblPlantsGene:Solyc06g060610.2	EnsemblPlants:Solyc06g060610.2.1	UniParc:UPI0002766379	:	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:K4C6P1]

Coordinates

chr6:-:38608017..38613319

Molecular Weight (calculated)

53835.9 Da

IEP (calculated)

5.753

GRAVY (calculated)

-0.326

Length

477 amino acids

Sequence
(BLAST)

001: MILKNVIFSN QPYTRTLVCH LPMSQNSSKN VAVIGAGSAG LVAARELQRE GHRVVVFERE NQLGGTWVYT PDTESDPVGI DPNREIVHSS LYSSLRVNLP
101: REVMGFGDYP FVAKKKPGRD PRRYPSHGEV LEYLNDFAVD FGIIGVVRFG MEVGFVGKME NGKWKVSCRK RENDDLFANE EYDAVVICNG HYTEPRIADI
201: PGIEVWPGKQ IHSHNYRVPD PFRDQVVVLI GGAASATDIS REIAEVAKEV HISSRSATSG VPMKLPGYDN IWLHNMIEAV GSDGGVNFQD GSKILADIIL
301: HCTGYKYHFP FLETNGIVTV DDNRVGPLYK HVFPPAFAPS LSFVGLPWKV IPFFLCELQS KWIAGVLSGR ISLPSKEDMN ADIEAFYSSM AASCIPKRYT
401: HNMDDSQFDY DDWLAAQCGS TPFEEWRKQM YLISRKNKRT LPETYRDEWD DDDLIIQAHE DFVKYIPELA QEQKLSR

Best Arabidopsis Sequence Match ( AT1G62620.1 )
(BLAST)

001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.