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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 4
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029865_P001 Maize mitochondrion 94.38 95.45
TraesCS1A01G210600.1 Wheat cytosol 67.87 83.2
OQU92170 Sorghum cytosol 67.87 81.84
Os10t0553800-01 Rice peroxisome 83.15 76.76
HORVU1Hr1G053900.1 Barley cytosol, peroxisome 83.37 76.18
TraesCS1B01G224600.2 Wheat cytosol 83.37 74.65
TraesCS1D01G213900.2 Wheat peroxisome 83.15 74.6
HORVU4Hr1G031220.3 Barley mitochondrion, peroxisome 43.82 74.14
HORVU7Hr1G027520.8 Barley endoplasmic reticulum, extracellular, golgi 48.09 68.37
GSMUA_Achr11P... Banana plastid 63.6 66.12
VIT_00s0233g00120.t01 Wine grape cytosol, peroxisome, vacuole 17.53 63.41
VIT_02s0154g00190.t01 Wine grape cytosol 62.47 60.83
Bra036655.1-P Field mustard plastid 13.93 60.78
CDY31816 Canola plastid 61.12 60.71
VIT_00s0233g00180.t01 Wine grape cytosol 62.02 60.39
Bra027033.1-P Field mustard cytoskeleton, cytosol, peroxisome 49.21 60.16
CDY68139 Canola mitochondrion 60.67 60.13
VIT_00s0233g00130.t01 Wine grape plastid 28.31 59.72
KXG40414 Sorghum cytosol 51.46 59.48
CDY31817 Canola cytosol 34.61 59.23
PGSC0003DMT400035866 Potato cytosol, peroxisome, plastid 60.45 59.12
KRH28040 Soybean peroxisome, plastid 60.67 59.08
CDY15973 Canola plastid 61.12 58.62
CDY72131 Canola cytosol 38.65 58.5
AT1G12200.1 Thale cress cytosol 61.12 58.49
Bra026986.1-P Field mustard plastid 60.9 58.41
CDY26543 Canola plastid 60.9 58.41
CDX98082 Canola cytosol 38.65 58.31
AT1G62620.1 Thale cress cytosol 58.88 58.22
VIT_02s0154g00170.t01 Wine grape vacuole 58.88 58.09
AT1G63370.1 Thale cress plastid 58.65 58.0
Bra019747.1-P Field mustard cytosol 60.45 57.97
GSMUA_Achr2P18520_001 Banana cytosol 49.44 57.89
AT1G62600.1 Thale cress mitochondrion, plastid 58.43 57.52
Bra027032.1-P Field mustard cytosol 54.38 57.35
CDY68140 Canola plastid 54.38 57.35
CDY31244 Canola plastid 57.3 56.92
PGSC0003DMT400043245 Potato cytosol, peroxisome, plastid 58.2 56.8
CDY21037 Canola plastid 56.85 56.47
AT1G12140.1 Thale cress mitochondrion 58.2 56.43
Bra026988.1-P Field mustard plastid 58.2 56.43
Solyc06g060610.2.1 Tomato mitochondrion 60.45 56.39
CDY15969 Canola plastid 57.98 56.21
AT1G63340.1 Thale cress plastid 53.48 56.13
CDY26541 Canola plastid 57.53 55.77
CDY39802 Canola plastid 15.73 55.12
VIT_02s0154g00180.t01 Wine grape cytosol, peroxisome, vacuole 55.51 54.29
AT1G62570.1 Thale cress cytosol 55.73 53.8
Bra027035.1-P Field mustard plastid 55.73 53.8
CDY03270 Canola cytosol 43.15 53.78
CDY12955 Canola extracellular, plastid 55.73 53.56
Bra016787.1-P Field mustard plastid 57.08 53.47
VIT_02s0154g00160.t01 Wine grape cytosol, peroxisome 52.58 53.42
AT1G62580.1 Thale cress cytosol, plastid 59.55 53.32
CDY31813 Canola plastid 55.06 53.15
CDY27695 Canola plastid 28.54 52.7
AT1G65860.1 Thale cress cytosol, extracellular, plastid 53.93 52.29
AT1G62560.1 Thale cress plastid 54.16 52.16
KXG38945 Sorghum mitochondrion 50.34 51.49
OQU92163 Sorghum mitochondrion 50.56 51.49
AT1G12130.1 Thale cress plastid 54.16 51.28
EER94515 Sorghum cytosol 49.89 50.92
CDX98777 Canola cytosol, peroxisome, plasma membrane 31.91 50.9
AT1G12160.1 Thale cress cytosol, mitochondrion 53.48 50.85
AT1G62540.2 Thale cress cytosol 55.06 50.83
KXG38941 Sorghum mitochondrion 49.44 50.57
VIT_00s0233g00170.t01 Wine grape cytosol 27.87 49.6
VIT_18s0075g00690.t01 Wine grape cytosol 11.24 49.02
AT1G63390.1 Thale cress mitochondrion 18.43 48.81
EER97845 Sorghum cytosol 41.35 43.6
OQU88310 Sorghum cytosol, mitochondrion 40.45 42.35
EER95747 Sorghum cytosol 43.15 40.59
Protein Annotations
Gene3D:3.50.50.60MapMan:35.1EntrezGene:8058749UniProt:C5WSI3EnsemblPlants:EER91959ProteinID:EER91959
ProteinID:EER91959.1InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0050660GO:GO:0050661GO:GO:0055114InterPro:IPR036188PFAM:PF00743
PIRSF:PIRSF000332PRINTS:PR00370PANTHER:PTHR23023PANTHER:PTHR23023:SF199EnsemblPlantsGene:SORBI_3001G303200SUPFAM:SSF51905
unigene:Sbi.1526UniParc:UPI0001A82524RefSeq:XP_002464961.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:+:58660083..58662430
Molecular Weight (calculated)
49856.0 Da
IEP (calculated)
6.001
GRAVY (calculated)
-0.307
Length
445 amino acids
Sequence
(BLAST)
001: MPSASLRLAV VGAGAAGLVA ARELRREGHA PVVFERAAAV GGTWLYTPPA TSSDPLGAAA THSSLYASLR TNLPRETMGF LDFPFAAGAA AAGSPRDPRR
101: FPGHEEVLRY LEAFARRFDL LRLVRFETEV LSVRREDGGG GRWAVTSRKL GEKGSGQEEF YDAVVVCNGH YTEPRIAVIP GVDAWPGKQM HSHNYRVPEP
201: FLDQVVIVIG ASASAFDISR DIASMAEEVH IADRSAPAST CKKEPGYDNL WLHSMIDHAQ EDGTVVFQDG SSIKADVIMH CTGYLYDFPF LGDDSTITVD
301: DNRVDPLYKH IFPPEVAPHL SFIGLPWKVI PFPLFELQSK WVARVLSGRV KLPSKDKMME DVKAFYLKLE ALGWPKRYTH NFSNHQFEYD DWLAEQCGYP
401: PIEEWRKQMY AVNAMNKAAR PESYRDEWDD EHLVAEANEY FKKFL
Best Arabidopsis Sequence Match ( AT1G62620.1 )
(BLAST)
001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS
Arabidopsis Description
Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.