CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
mitochondrion 2
peroxisome 1
plastid 1
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER98853

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	EER98853	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88310	Sorghum	cytosol, mitochondrion	68.71	76.47
Zm00001d018650_P001	Maize	cytosol	73.15	74.73
EER97845	Sorghum	cytosol	66.6	74.64
Zm00001d018649_P001	Maize	cytosol	69.34	68.05
Os07t0112000-00	Rice	cytosol	61.31	60.54
Os07t0111700-01	Rice	cytosol, peroxisome	58.99	59.74
Os07t0111900-00	Rice	extracellular	59.83	59.45
Os06t0528700-01	Rice	plasma membrane	60.68	59.18
Os01t0368000-00	Rice	cytosol	55.6	57.42
Bra012970.1-P	Field mustard	cytosol	47.99	50.78
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	48.84	50.77
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	48.63	50.66
CDY02158	Canola	cytosol	42.92	50.62
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	48.41	50.55
Bra012971.1-P	Field mustard	cytosol	49.05	50.43
CDY23072	Canola	cytosol	42.71	50.37
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	48.2	50.33
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	48.2	50.11
CDY40773	Canola	mitochondrion	48.63	50.11
CDY23071	Canola	cytosol	48.84	50.0
AT5G61290.1	Thale cress	cytosol	48.63	49.89
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	48.41	49.89
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	48.41	49.67
CDY02157	Canola	cytosol	48.41	49.57
Bra028683.1-P	Field mustard	mitochondrion	47.99	49.46
AT5G07800.1	Thale cress	cytosol	47.36	48.7
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.99	45.61
KXG38941	Sorghum	mitochondrion	39.96	43.45
EER91959	Sorghum	mitochondrion	40.59	43.15
OQU92163	Sorghum	mitochondrion	38.9	42.11
KXG38945	Sorghum	mitochondrion	38.27	41.61
EER94515	Sorghum	cytosol	37.84	41.05
OQU92170	Sorghum	cytosol	30.66	39.3
KXG40414	Sorghum	cytosol	31.08	38.18
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	50.32	22.33

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	EntrezGene:8054518	UniProt:C5X789	EnsemblPlants:EER95747	ProteinID:EER95747
ProteinID:EER95747.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	EnsemblPlantsGene:SORBI_3002G008200	SUPFAM:SSF51905
UniParc:UPI0001A82D32	RefSeq:XP_002459226.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:756264..757814

Molecular Weight (calculated)

52268.7 Da

IEP (calculated)

6.363

GRAVY (calculated)

-0.336

Length

473 amino acids

Sequence
(BLAST)

001: MASSSSKKVC VVGAGVSGLV SARELRREGH DVTVMEQSGG IGGQWLYDPR TDAGDPLGVA GAQSSIYASL RLNTPRETTS LSDFPFFPTN DGTGGDARRY
101: PLHGEFLSYI RDFCGAFGLM DAVRLNTKVL HVGPLAPCGR GRGHDGAVTR WMVRWSRHGD CEGQVVTAEE VFDAVVVAVG QNTQPRLPTI NGMDKWSRRQ
201: LHSHSYRSPD SFDDQVVVVV GCHPSGTDIA LELCTVAREV HISVKSMDAA AVVPGMRRAV SRHDNLHLHL QIDCLCEDGQ VMFADGSCVV ADSIIYCTGY
301: DFSFPFLDTG GLVTVDDNRV GPLFEHTFPP SLSFVGVPRM VVVPRFYEAQ ARWVAQVLSG RRPPLPPEEE MLRAAEYHHR AREEAGVPRR QSHNIFFDVD
401: YMDEFGAKHC GFPRLPEWKK ELLRSSVARL RDATESYRDD YRDSGLVREG LQAQGWLTGR PPPPPDTRVE NES

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.