CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER98853

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	EER98853	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018652_P001	Maize	endoplasmic reticulum	81.88	72.96
EER95747	Sorghum	cytosol	76.47	68.71
EER97845	Sorghum	cytosol	64.0	64.45
Os07t0112000-00	Rice	cytosol	64.71	57.41
Os07t0111900-00	Rice	extracellular	64.0	57.14
Os07t0111700-01	Rice	cytosol, peroxisome	61.88	56.32
Os06t0528700-01	Rice	plasma membrane	61.88	54.23
Os01t0368000-00	Rice	cytosol	57.88	53.71
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	52.47	49.01
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	52.24	48.9
Bra012971.1-P	Field mustard	cytosol	52.47	48.48
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	51.76	48.35
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	51.06	47.9
CDY02158	Canola	cytosol	45.18	47.88
AT5G61290.1	Thale cress	cytosol	51.76	47.72
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	50.82	47.68
CDY23072	Canola	cytosol	44.94	47.63
CDY40773	Canola	mitochondrion	51.29	47.49
Bra028683.1-P	Field mustard	mitochondrion	51.06	47.28
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	51.06	47.28
Bra012970.1-P	Field mustard	cytosol	49.65	47.2
AT5G07800.1	Thale cress	cytosol	50.82	46.96
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	50.82	46.85
CDY23071	Canola	cytosol	50.59	46.54
CDY02157	Canola	cytosol	50.59	46.54
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.76	43.86
KXG38941	Sorghum	mitochondrion	43.06	42.07
KXG38945	Sorghum	mitochondrion	41.88	40.92
OQU92163	Sorghum	mitochondrion	41.88	40.73
EER91959	Sorghum	mitochondrion	42.35	40.45
EER94515	Sorghum	cytosol	40.71	39.68
OQU92170	Sorghum	cytosol	33.18	38.21
KXG40414	Sorghum	cytosol	33.41	36.88
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	53.18	21.2

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A1W0W1Q4	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114
InterPro:IPR036188	EnsemblPlants:OQU88310	ProteinID:OQU88310	ProteinID:OQU88310.1	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	EnsemblPlantsGene:SORBI_3002G008400	SUPFAM:SSF51905	UniParc:UPI0001A83656
RefSeq:XP_002461324.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:766073..767403

Molecular Weight (calculated)

47175.8 Da

IEP (calculated)

5.855

GRAVY (calculated)

-0.218

Length

425 amino acids

Sequence
(BLAST)

001: MVSMSSKKVC VIGAGVSGLA SARELLREGH DVTVVEQSGG VGGQWLYDPS TDGGKPLGAA GAHSSMYASV RLISPRELTA FSDFPFFPNN DGTGDARRYP
101: GHGELLRYIR DFCDAFGLMD VVSSTPRSCM SAWPRRRRRD ALDDRERDAV TTEEVFDAVV VAVGQYTQPR LPVINGMDKW SRRQLHSHSY RVPVSFHGEV
201: VVIVGFHESG KDIALELSRV AREAVSRHDN LHLHLQIDCL CEDGQVMFAD GSCVVADSII YCTGYDFSFP FLDTGGLVTV DDNRVGPLFE HTFPPALAPS
301: LSFVGVPRLV LVPRFYEAQA RWVAQVLSGR RPLPSSEEMM RAAMEYHLSR EAAGVPRRLS HTVFFDMDYC DEFGAKHCGF PPLEGWKRDL LSSAVARVRD
401: GDMESYRDTY HDSDLVLEGL RSEGW

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.