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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • peroxisome 1
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69991 Canola cytosol, mitochondrion, peroxisome, plastid 98.45 98.45
Bra009308.1-P Field mustard cytosol, mitochondrion, peroxisome 98.9 97.18
CDY40773 Canola mitochondrion 93.38 92.16
CDY14028 Canola cytosol, mitochondrion, peroxisome, plastid 93.16 91.94
AT5G07800.1 Thale cress cytosol 92.94 91.52
CDY02158 Canola cytosol 67.99 76.81
CDY23072 Canola cytosol 67.77 76.56
CDY02157 Canola cytosol 77.04 75.54
PGSC0003DMT400063125 Potato cytosol, peroxisome, plastid 75.5 75.16
CDY23071 Canola cytosol 76.6 75.11
Solyc03g115560.2.1 Tomato cytosol, peroxisome, plastid 74.61 74.29
VIT_17s0000g06790.t01 Wine grape cytosol, peroxisome, plastid 73.07 72.91
KRH63273 Soybean cytosol, peroxisome, plastid 72.41 71.46
KRH54615 Soybean cytosol 49.23 70.79
KRH56869 Soybean cytosol 66.67 65.51
KRH56870 Soybean cytosol, nucleus, peroxisome 65.34 64.77
KRH56868 Soybean cytosol, peroxisome, plastid 49.23 60.27
TraesCS1B01G006000.1 Wheat mitochondrion 49.67 55.69
TraesCS6A01G150700.1 Wheat cytosol 48.34 52.52
TraesCS1B01G006200.1 Wheat cytosol 51.66 52.47
TraesCS6A01G120500.2 Wheat cytosol 55.41 52.07
TraesCS6D01G110500.1 Wheat cytosol 54.53 51.78
OQU88310 Sorghum cytosol, mitochondrion 47.68 50.82
TraesCS6B01G178800.1 Wheat cytosol 54.08 50.52
TraesCSU01G030500.1 Wheat cytosol 47.46 50.47
TraesCS4B01G269700.1 Wheat cytosol 54.53 49.9
TraesCS4D01G269000.1 Wheat cytosol 54.3 49.5
TraesCS5B01G194300.1 Wheat cytosol 51.66 49.26
EER97845 Sorghum cytosol 45.7 49.05
Os07t0111700-01 Rice cytosol, peroxisome 50.33 48.82
Os07t0112000-00 Rice cytosol 51.43 48.64
TraesCS6D01G110300.1 Wheat cytosol 53.86 48.51
EER95747 Sorghum cytosol 50.55 48.41
TraesCS7D01G425900.1 Wheat cytosol 51.88 48.25
HORVU4Hr1G072260.1 Barley cytosol 53.42 48.21
Zm00001d018650_P001 Maize cytosol 49.23 48.16
Os07t0111900-00 Rice extracellular 50.55 48.11
Zm00001d018652_P001 Maize endoplasmic reticulum 49.89 47.38
Zm00001d018648_P001 Maize cytosol 51.88 47.19
Os07t0112100-00 Rice cytosol 52.98 47.06
TraesCS6B01G148900.1 Wheat cytosol 52.76 46.68
TraesCS3A01G010900.1 Wheat cytosol 51.66 46.61
TraesCSU01G033300.1 Wheat cytosol 49.89 46.5
HORVU5Hr1G078450.1 Barley cytosol 28.7 46.43
Os02t0580600-01 Rice cytosol 47.9 46.27
TraesCS5A01G522900.1 Wheat cytosol 50.33 45.88
TraesCS5B01G531000.1 Wheat cytosol 50.11 45.86
TraesCSU01G087500.1 Wheat cytosol 53.86 45.78
CDY15969 Canola plastid 46.36 45.75
CDY68139 Canola mitochondrion 45.25 45.66
Zm00001d018649_P001 Maize cytosol 48.57 45.64
TraesCSU01G032200.1 Wheat peroxisome 48.34 45.62
CDY31816 Canola plastid 45.03 45.54
CDY26541 Canola plastid 46.14 45.53
CDY15973 Canola plastid 46.58 45.47
CDY26543 Canola plastid 46.58 45.47
TraesCSU01G045200.2 Wheat cytosol 51.66 45.17
TraesCS3B01G014100.2 Wheat cytosol 51.66 45.17
Os06t0528700-01 Rice plasma membrane 48.34 45.15
CDY31244 Canola plastid 44.59 45.09
CDY21037 Canola plastid 44.59 45.09
TraesCS3D01G000800.1 Wheat cytosol 51.21 44.96
CDY31813 Canola plastid 45.7 44.9
Os01t0368000-00 Rice cytosol 45.25 44.76
CDY12955 Canola extracellular, plastid 45.47 44.49
TraesCS5A01G298300.1 Wheat cytosol 48.12 44.4
TraesCSU01G033200.1 Wheat cytosol 25.83 43.98
CDY72131 Canola cytosol 28.48 43.88
TraesCS5B01G530900.1 Wheat cytosol 50.11 43.82
HORVU4Hr1G089360.1 Barley cytosol 49.23 43.73
TraesCS5B01G297400.1 Wheat cytosol 44.59 43.72
CDY68140 Canola plastid 40.62 43.6
CDX98082 Canola cytosol 28.26 43.39
CDY39802 Canola plastid 12.14 43.31
CDY27695 Canola plastid 22.96 43.15
CDY03270 Canola cytosol 32.45 41.18
CDY31817 Canola cytosol 23.4 40.77
CDY27691 Canola cytosol 11.92 38.57
CDX98777 Canola cytosol, peroxisome, plasma membrane 22.74 36.92
VIT_17s0000g06780.t01 Wine grape cytosol, peroxisome, plastid 74.17 31.52
Protein Annotations
Gene3D:3.50.50.60MapMan:35.1GO:A0A078EAD8EnsemblPlants:CDX99030ProteinID:CDX99030ProteinID:CDX99030.1
InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0050660GO:GO:0050661
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00107158001InterPro:IPR036188PFAM:PF00743PIRSF:PIRSF000332PRINTS:PR00370
PANTHER:PTHR23023PANTHER:PTHR23023:SF86SUPFAM:SSF51905UniParc:UPI0004EE7625SEG:seg:
Description
BnaC09g48050D
Coordinates
chrLK031907:-:1215064..1217581
Molecular Weight (calculated)
51492.0 Da
IEP (calculated)
6.311
GRAVY (calculated)
-0.390
Length
453 amino acids
Sequence
(BLAST)
001: MVSVTSSEAS RSRSKKVCVI GAGPSGLVSA RELRKEGHKV VVMEQNDDVG GQWLYQPNVE EEDPLGGSSV HSSIYSSLRL TSPREIMGYS DFPFLAKKGR
101: DMRRFPGHKE LWLYLKDFSE AFGIREMIRF NVRVEFVGEE EKREDVRRWI VRSREKSSGK VIEEIFDAVV VATGHYSHPR LPSIKGMDSW KRKQVHSHVY
201: RVPDPFRNEV VVVVGNSMSG QDISMELVEV AKEVHLSAKS LDISSGLSKV ISKHQNLLLH PQIESLEDDG RVIFVDGTWV VADTILYCTG YSYKFPFLES
301: KGRVEVDDDR VGPLFEHTFP PCLSPSLSFV GIPRKLIGFP FFEAQAKWIA QVLSGKSSLP SPDQMLQSVA DFYRSRDLAG IPKHNTHDIA DFTYCDKYAD
401: YVGFPHLEEW RKQLCLSALT NSQENLETYR DSWDDHELLQ EALQSSHFTN FDC
Best Arabidopsis Sequence Match ( AT5G07800.1 )
(BLAST)
001: MVTFTSEASR SRSKKVCVIG AGPAGLVSAR ELRKEGHKVV VLEQNEDVGG QWFYQPNVEE EDPLGRSSGS INGELKVHSS IYSSLRLTSP REIMGYSDFP
101: FLAKKGRDMR RFPGHKELWL YLKDFSEAFG LREMIRFNVR VEFVGEKEEE DDVKKWIVRS REKFSGKVME EIFDAVVVAT GHYSHPRLPS IKGMDSWKRK
201: QIHSHVYRVP DPFRNEVVVV VGNSMSGQDI SMELVEVAKE VHLSAKTLDI SSGLSKVISK HPNLLIHPQI ESLEDDGKVI FVDGSWVVAD TILYCTGYSY
301: KFPFLESKGR IEVDDDRVGP LFEHTFPPCL SPSLSFVGIP RKLIGFPFFE AQAKWIAQVL SGKSSLPSPD QMLQSVDEFY RSRDLAGVPK HNTHDIADFT
401: YCDKYADYVG FPHLEDWRKL LCLSALNNSQ ENLETYRDSW DDHELLQEAL QSSHFTNFNS
Arabidopsis Description
Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178UJX2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.