Factsheet for TraesCS1B01G006000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G006200.1	Wheat	cytosol	94.06	85.2
TraesCS6A01G120500.2	Wheat	cytosol	82.67	69.29
TraesCS6D01G110300.1	Wheat	cytosol	82.92	66.6
TraesCS6B01G178800.1	Wheat	cytosol	79.46	66.19
TraesCS6B01G148900.1	Wheat	cytosol	80.69	63.67
TraesCSU01G087500.1	Wheat	cytosol	81.68	61.91
TraesCS4B01G269700.1	Wheat	cytosol	71.78	58.59
TraesCS5B01G194300.1	Wheat	cytosol	67.08	57.05
TraesCS3B01G014100.2	Wheat	cytosol	71.78	55.98
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	58.91	52.42
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	58.17	51.65
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	58.17	51.65
Bra012970.1-P	Field mustard	cytosol	56.44	51.01
Bra012971.1-P	Field mustard	cytosol	57.18	50.22
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	56.93	50.11
CDY23071	Canola	cytosol	57.18	50.0
CDY40773	Canola	mitochondrion	56.68	49.89
CDY02157	Canola	cytosol	56.93	49.78
Bra028683.1-P	Field mustard	mitochondrion	56.44	49.67
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	55.69	49.67
TraesCS5B01G531000.1	Wheat	cytosol	60.64	49.49
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	55.45	49.45
AT5G07800.1	Thale cress	cytosol	56.19	49.35
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	56.19	49.24
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	13.86	49.12
AT5G61290.1	Thale cress	cytosol	55.69	48.81
TraesCS5B01G297400.1	Wheat	cytosol	55.69	48.7
CDY02158	Canola	cytosol	48.27	48.63
CDY23072	Canola	cytosol	48.02	48.38
TraesCS5B01G530900.1	Wheat	cytosol	59.65	46.53
TraesCS4B01G370500.1	Wheat	mitochondrion	46.04	41.89
TraesCS4B01G370200.1	Wheat	mitochondrion	46.04	40.17
TraesCS4B01G366800.1	Wheat	plastid	46.29	40.04
TraesCS4B01G370400.1	Wheat	mitochondrion	46.53	39.83
TraesCS1B01G224600.2	Wheat	cytosol	44.55	36.22
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	56.93	21.58

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS1B01G006000	EnsemblPlants:TraesCS1B01G006000.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:3881528..3884670

Molecular Weight (calculated)

44629.6 Da

IEP (calculated)

6.324

GRAVY (calculated)

-0.122

Length

404 amino acids

Sequence
(BLAST)

001: MVGNGIMAPS QRKKVCVIGA GMAGLVSARE LRREGDDVTV LEQRGDVGGQ WLYDPRVDGT DPLGTAEPVK VHSSLYASLC LISARETMGF TDFPFAPKPK
101: DGRDSRRFPG HREVYLYLKD FCDAFGLMEL VRLNTSAARV ALAPGPTPTR QWTVSSVDLG KCNGTEEEEE VFDAVVVANG HYSQPILPTI KGMQVWRGRQ
201: MHSHSYRVPE QFRDEVVVVV GCGLSGMEIA MEVRGVAKEV HLVAKSMEEV TQGLAKVLAK HSVSLHLQLH VERLCQDGRV VFGDGSSVLA DTVIYCTGYN
301: YTFPFLDTEG AVTVDDNRVG PLFEHVFPPT LAPSLSFIGI PKKVFAPWFF EAQAKWVAHV LSGKRTLPPE EEMMRSVEEF YHARDIAGVP KKFTHDVSLF
401: DITT

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.