Factsheet for TraesCS6A01G120500.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G110500.1	Wheat	cytosol	89.42	90.36
TraesCS6D01G110300.1	Wheat	cytosol	87.34	83.7
TraesCS1B01G006000.1	Wheat	mitochondrion	69.29	82.67
TraesCS6B01G148900.1	Wheat	cytosol	87.34	82.23
TraesCS1B01G006200.1	Wheat	cytosol	75.1	81.17
TraesCS6A01G150700.1	Wheat	cytosol	68.26	78.9
TraesCSU01G087500.1	Wheat	cytosol	87.14	78.8
TraesCS3A01G010900.1	Wheat	cytosol	68.88	66.14
TraesCS5A01G522900.1	Wheat	cytosol	60.17	58.35
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	54.98	58.24
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	54.36	57.58
TraesCS5A01G298300.1	Wheat	cytosol	58.09	57.03
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	53.53	56.83
Bra012970.1-P	Field mustard	cytosol	51.87	55.93
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	52.07	55.41
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	52.7	55.34
CDY40773	Canola	mitochondrion	52.49	55.12
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	51.66	54.97
Bra012971.1-P	Field mustard	cytosol	52.28	54.78
CDY23071	Canola	cytosol	52.49	54.76
CDY02157	Canola	cytosol	52.49	54.76
Bra028683.1-P	Field mustard	mitochondrion	52.07	54.68
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	52.07	54.45
CDY23072	Canola	cytosol	45.23	54.36
CDY02158	Canola	cytosol	45.23	54.36
AT5G07800.1	Thale cress	cytosol	51.87	54.35
AT5G61290.1	Thale cress	cytosol	50.83	53.15
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.83	50.0
TraesCS6A01G150100.1	Wheat	mitochondrion	17.22	45.36
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	30.5	44.41
TraesCS1A01G211100.1	Wheat	peroxisome	41.08	43.71
TraesCS1A01G210600.1	Wheat	cytosol	32.37	42.98
TraesCS5A01G534500.1	Wheat	cytosol	40.66	41.61
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	41.7	37.71
TraesCS5A01G536300.1	Wheat	cytosol	4.98	26.97
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	52.7	23.83

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS6A01G120500	EnsemblPlants:TraesCS6A01G120500.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:91976546..91978356

Molecular Weight (calculated)

53641.7 Da

IEP (calculated)

5.108

GRAVY (calculated)

-0.253

Length

482 amino acids

Sequence
(BLAST)

001: MVSDDIKIKP LQRHKVCVIG AGMAGLASAR ELRREGHGVT VLEQSGDVGG QWLYDPRVDG DDLLGAAEPP VKVHGSMYAS LRLISARENM GFTDFQFAPK
101: DGLDGRRFPG HREVYLYLKD FCDAFGLMES VRLNTSVVRV APAAGPTLRW TVRSVDLGKC DGDGAGEVEE EEVFDAVVVA NGHYSQPRLP SIPGMEAWRG
201: RQVHSHSYRE PEPFRGEVVV VVGCGESGKD IAMEVRRVAK EVHLVAKSME EVTQGLAKVL AKHSASLHLQ LHVERLCEDG RVVFGDGSTV LADTIIYCTG
301: YSYSFPFLDT EGAVTVDDNR VGPLFEHVFP PSLPSLSFVG IPIKVFAPWF FEAQAKWVAQ VLSGKRTLPP EEEMMRSVEE YYRAREVAGA PKKYTHDVSL
401: FDTTYIDEFA SKYCDFPGVE KWRYELLVSS FVNMLDNLET FRDEYEDSDT IRKGVEEWHL SAQQAQAAAT KKQSLGLLEH VE

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.