Factsheet for TraesCS5A01G522900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G032200.1	Wheat	peroxisome	85.92	88.96
HORVU4Hr1G089360.1	Barley	cytosol	84.71	82.55
TraesCS5A01G298300.1	Wheat	cytosol	74.85	75.76
Os07t0112100-00	Rice	cytosol	62.78	61.18
TraesCS6A01G120500.2	Wheat	cytosol	58.35	60.17
TraesCS7D01G425900.1	Wheat	cytosol	58.95	60.16
TraesCS6A01G150700.1	Wheat	cytosol	50.3	59.95
Os02t0580600-01	Rice	cytosol	52.92	56.08
TraesCS3A01G010900.1	Wheat	cytosol	55.94	55.38
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	47.89	52.31
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	47.89	52.31
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	46.88	51.32
Bra012970.1-P	Field mustard	cytosol	45.27	50.34
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	45.88	50.33
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	45.47	49.89
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	45.88	49.67
CDY23071	Canola	cytosol	46.08	49.57
Bra012971.1-P	Field mustard	cytosol	45.88	49.57
CDY02157	Canola	cytosol	45.88	49.35
AT5G61290.1	Thale cress	cytosol	45.67	49.24
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	45.67	49.24
CDY40773	Canola	mitochondrion	45.47	49.24
Bra028683.1-P	Field mustard	mitochondrion	45.07	48.8
AT5G07800.1	Thale cress	cytosol	45.07	48.7
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.07	48.25
CDY02158	Canola	cytosol	38.63	47.88
CDY23072	Canola	cytosol	38.23	47.38
TraesCS6A01G150100.1	Wheat	mitochondrion	15.9	43.17
TraesCS1A01G211100.1	Wheat	peroxisome	37.83	41.5
TraesCS1A01G210600.1	Wheat	cytosol	28.97	39.67
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	25.96	38.97
TraesCS5A01G534500.1	Wheat	cytosol	36.62	38.64
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	38.23	35.65
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	48.29	22.51
TraesCS5A01G536300.1	Wheat	cytosol	3.82	21.35

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS5A01G522900	EnsemblPlants:TraesCS5A01G522900.1	SEG:seg

Description

No Description!

Coordinates

chr5A:+:684197293..684198786

Molecular Weight (calculated)

54544.7 Da

IEP (calculated)

5.365

GRAVY (calculated)

-0.201

Length

497 amino acids

Sequence
(BLAST)

001: MAAGDGEPAL QSKSVCVVGG GVAGLAAARE LRREGHAVTV MEQSADVGGQ WLYDPRTDGE DPLGAAAPVR VPSSIYACLR LISPREAMGF SDFQFFPRDG
101: PGRDPCRFPV HGELHCYLRD FCDAFGLMDA VRLHTRVLRV ALTPTSTTAN RRWTVRSVRR LGTTDDDDVA HEEEEEEEVF DAVVVATGHY SQPMLPGDIE
201: GMGEWTRRQL HSHSYRTPEP FRGEAVVVVG CAESGKDIAL DLCRVAREVH LAASSEATAA TPAMSRMLAN HGDVLRLHPR IRRLHADGRV EFADGSSVVA
301: DTVIYCTGYT YSFPFLDTGG AVTIDSGGHV VGPLFEHVFP PSLAPSLSFV GVARKVLIPW FFEVQARWVA QVLSGRRALP AEEEMLRSVE EHLRAREAAG
401: MARKHTHNIA GIEPEKMYEF GERYSDLPPL EEWKKELVMS SIASMLADVE TFRDRAYDDS EIVRKGLRGW LDLAAKAQAK SMAVAVDVEA DVQAMAN

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.