Factsheet for TraesCS5A01G536500.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 1
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plastid
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G370400.1	Wheat	mitochondrion	77.86	87.92
TraesCS4D01G360900.1	Wheat	cytosol	78.24	86.34
TraesCS5A01G534500.1	Wheat	cytosol	67.92	76.86
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	41.84	67.37
TraesCS6A01G150100.1	Wheat	mitochondrion	22.14	64.48
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	14.45	62.6
TraesCS1A01G210600.1	Wheat	cytosol	40.53	59.5
Bra036655.1-P	Field mustard	plastid	11.26	58.82
KXG40414	Sorghum	cytosol	41.46	57.4
Zm00001d027286_P001	Maize	cytosol	40.71	56.66
GSMUA_Achr11P...	Banana	plastid	45.22	56.31
VIT_00s0233g00130.t01	Wine grape	plastid	22.14	55.92
VIT_02s0154g00190.t01	Wine grape	cytosol	47.84	55.8
VIT_00s0233g00180.t01	Wine grape	cytosol	47.84	55.8
CDY31816	Canola	plastid	45.97	54.69
CDY68139	Canola	mitochondrion	45.78	54.34
KRH28040	Soybean	peroxisome, plastid	46.15	53.83
AT1G62620.1	Thale cress	cytosol	45.4	53.78
CDY31817	Canola	cytosol	26.08	53.46
AT1G63370.1	Thale cress	plastid	45.03	53.33
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	36.4	53.3
VIT_02s0154g00170.t01	Wine grape	vacuole	45.03	53.22
AT1G62600.1	Thale cress	mitochondrion, plastid	45.03	53.1
CDY68140	Canola	plastid	42.03	53.08
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	45.22	52.97
Bra027032.1-P	Field mustard	cytosol	41.84	52.84
TraesCS5A01G536300.1	Wheat	cytosol	8.82	52.81
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	44.65	52.31
CDY31244	Canola	plastid	43.9	52.23
CDY15973	Canola	plastid	45.4	52.16
Bra026988.1-P	Field mustard	plastid	44.84	52.07
CDY21037	Canola	plastid	43.71	52.01
CDY26543	Canola	plastid	45.22	51.94
CDY15969	Canola	plastid	44.65	51.85
CDY26541	Canola	plastid	44.65	51.85
Bra026986.1-P	Field mustard	plastid	45.03	51.72
AT1G12140.1	Thale cress	mitochondrion	44.47	51.63
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	43.9	51.32
AT1G12200.1	Thale cress	cytosol	44.65	51.18
Solyc06g060610.2.1	Tomato	mitochondrion	45.78	51.15
Bra019747.1-P	Field mustard	cytosol	44.47	51.08
Bra027035.1-P	Field mustard	plastid	44.09	50.98
CDY12955	Canola	extracellular, plastid	44.09	50.76
GSMUA_Achr2P18520_001	Banana	cytosol	36.02	50.53
CDY39802	Canola	plastid	12.01	50.39
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	43.34	50.33
CDY31813	Canola	plastid	43.53	50.33
CDY27695	Canola	plastid	22.7	50.21
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	41.09	50.0
AT1G63340.1	Thale cress	plastid	39.77	50.0
CDY72131	Canola	cytosol	27.58	50.0
CDX98082	Canola	cytosol	27.58	49.83
AT1G12130.1	Thale cress	plastid	43.9	49.79
AT1G63390.1	Thale cress	mitochondrion	15.57	49.4
Bra016787.1-P	Field mustard	plastid	43.9	49.26
AT1G62570.1	Thale cress	cytosol	42.21	48.81
VIT_00s0233g00170.t01	Wine grape	cytosol	22.89	48.8
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	11.07	48.76
AT1G12160.1	Thale cress	cytosol, mitochondrion	42.78	48.72
TraesCS1A01G211100.1	Wheat	peroxisome	40.9	48.12
CDY03270	Canola	cytosol	32.08	47.9
CDX98777	Canola	cytosol, peroxisome, plasma membrane	24.77	47.31
AT1G62540.2	Thale cress	cytosol	42.59	47.1
VIT_18s0075g00690.t01	Wine grape	cytosol	9.01	47.06
AT1G62560.1	Thale cress	plastid	40.71	46.97
AT1G62580.1	Thale cress	cytosol, plastid	42.78	45.88
TraesCS6A01G150700.1	Wheat	cytosol	35.08	44.84
TraesCS6A01G120500.2	Wheat	cytosol	37.71	41.7
TraesCS3A01G010900.1	Wheat	cytosol	36.96	39.24
TraesCS5A01G522900.1	Wheat	cytosol	35.65	38.23
TraesCS5A01G298300.1	Wheat	cytosol	34.71	37.68

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF199	SUPFAM:SSF51905	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G536500	EnsemblPlants:TraesCS5A01G536500.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:692844798..692847674

Molecular Weight (calculated)

59126.5 Da

IEP (calculated)

6.330

GRAVY (calculated)

-0.102

Length

533 amino acids

Sequence
(BLAST)

001: MKKTTHPTTR EQTSRDLETF PPPMSSSRVA VIGAGAAGLV AARELRREGH APVVFERAAG VGGTWRYDDA ASADPLGAGG VHGSLYASLR TNLPRECMGF
101: LDFPFVADEG SVDPRRFPGH QEVLGYLEAF ARRFDLLRLV RLQTEVVGVR RSCDEAGAAG WSVSYCSRKL AGAGSDLEGE QSEVFDAVVV CNGHFAEPRL
201: ADIAGIGGWP GKQMHSHSYR VPDPFHGQVV VIIGYNPSGM DISRDIAGVA KEVHVAIRSA PAEMQSATAH ANLWLHPMIE FAEEDGSVVF RDGSRVKADA
301: IVHCTGYKYR FPFLEEEDGI VSVDDARVGP LYKHVFPPHL APHISFIGLP FKSILFPVFR LQSNWVAGAL SGRIELPSPE EMMLDVTAFY SNMEVRGWPK
401: KFTHNLGVEA WTVRAVYLCY VYTSSILLML IYSKLIYIIC FGVLQFEYED WLSEQCGLKK MEEWRRVIYA AGRARVSVRP ESYRDEWDDN QLLAQAHLDL
501: SKYISDVTSS MATYDVASVD LSSLRAHAIK EIR

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.