Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G63370.1 | Thale cress | plastid | 99.33 | 99.33 |
| AT1G62600.1 | Thale cress | mitochondrion, plastid | 86.44 | 86.06 |
| AT1G63390.1 | Thale cress | mitochondrion | 31.33 | 83.93 |
| CDY31816 | Canola | plastid | 81.11 | 81.47 |
| CDY68140 | Canola | plastid | 76.22 | 81.28 |
| Bra027032.1-P | Field mustard | cytosol | 75.78 | 80.81 |
| CDY68139 | Canola | mitochondrion | 79.78 | 79.96 |
| Bra027033.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 64.0 | 79.12 |
| CDY31817 | Canola | cytosol | 45.11 | 78.08 |
| VIT_00s0233g00120.t01 | Wine grape | cytosol, peroxisome, vacuole | 17.78 | 65.04 |
| VIT_00s0233g00130.t01 | Wine grape | plastid | 30.0 | 63.98 |
| AT1G12200.1 | Thale cress | cytosol | 66.0 | 63.87 |
| AT1G63340.1 | Thale cress | plastid | 58.22 | 61.79 |
| KRH28040 | Soybean | peroxisome, plastid | 62.22 | 61.27 |
| VIT_02s0154g00170.t01 | Wine grape | vacuole | 60.44 | 60.31 |
| AT1G12140.1 | Thale cress | mitochondrion | 61.33 | 60.13 |
| VIT_02s0154g00190.t01 | Wine grape | cytosol | 60.89 | 59.96 |
| PGSC0003DMT400035866 | Potato | cytosol, peroxisome, plastid | 60.22 | 59.56 |
| Zm00001d029865_P001 | Maize | mitochondrion | 58.22 | 59.55 |
| GSMUA_Achr11P... | Banana | plastid | 56.44 | 59.35 |
| VIT_00s0233g00180.t01 | Wine grape | cytosol | 60.0 | 59.08 |
| AT1G62570.1 | Thale cress | cytosol | 60.44 | 59.0 |
| EER91959 | Sorghum | mitochondrion | 58.22 | 58.88 |
| AT1G62560.1 | Thale cress | plastid | 59.78 | 58.23 |
| TraesCS1A01G210600.1 | Wheat | cytosol | 46.67 | 57.85 |
| PGSC0003DMT400043245 | Potato | cytosol, peroxisome, plastid | 58.44 | 57.68 |
| AT1G65860.1 | Thale cress | cytosol, extracellular, plastid | 58.67 | 57.52 |
| Solyc06g060610.2.1 | Tomato | mitochondrion | 60.89 | 57.44 |
| AT1G62580.1 | Thale cress | cytosol, plastid | 62.89 | 56.94 |
| OQU92170 | Sorghum | cytosol | 46.67 | 56.91 |
| VIT_02s0154g00180.t01 | Wine grape | cytosol, peroxisome, vacuole | 56.89 | 56.26 |
| AT1G12130.1 | Thale cress | plastid | 58.44 | 55.96 |
| VIT_02s0154g00160.t01 | Wine grape | cytosol, peroxisome | 54.0 | 55.48 |
| AT1G62540.2 | Thale cress | cytosol | 59.33 | 55.39 |
| AT1G12160.1 | Thale cress | cytosol, mitochondrion | 57.11 | 54.91 |
| TraesCS5A01G536600.1 | Wheat | cytosol, peroxisome, plastid | 40.0 | 54.38 |
| Os10t0553800-01 | Rice | peroxisome | 57.78 | 53.94 |
| TraesCS4B01G370500.1 | Wheat | mitochondrion | 52.22 | 52.93 |
| TraesCS4B01G370200.1 | Wheat | mitochondrion | 54.22 | 52.7 |
| HORVU4Hr1G031220.3 | Barley | mitochondrion, peroxisome | 30.67 | 52.47 |
| HORVU1Hr1G053900.1 | Barley | cytosol, peroxisome | 56.67 | 52.36 |
| HORVU4Hr1G087900.7 | Barley | cytosol, peroxisome | 45.11 | 52.32 |
| TraesCS4D01G361000.1 | Wheat | cytosol | 53.56 | 52.28 |
| TraesCS4D01G360800.1 | Wheat | cytosol | 36.89 | 52.2 |
| GSMUA_Achr2P18520_001 | Banana | cytosol | 44.0 | 52.11 |
| Zm00001d027286_P001 | Maize | cytosol | 44.0 | 51.7 |
| KXG40414 | Sorghum | cytosol | 44.22 | 51.69 |
| HORVU1Hr1G091130.12 | Barley | cytosol, mitochondrion, peroxisome, plastid | 54.0 | 51.59 |
| TraesCS6A01G150100.1 | Wheat | mitochondrion | 20.89 | 51.37 |
| TraesCS6D01G139800.1 | Wheat | mitochondrion | 51.33 | 51.33 |
| TraesCS1B01G224600.2 | Wheat | cytosol | 56.67 | 51.31 |
| TraesCS4B01G370400.1 | Wheat | mitochondrion | 53.78 | 51.27 |
| TraesCS1D01G213900.2 | Wheat | peroxisome | 56.44 | 51.21 |
| HORVU6Hr1G029800.7 | Barley | mitochondrion | 47.11 | 51.21 |
| VIT_18s0075g00690.t01 | Wine grape | cytosol | 11.56 | 50.98 |
| TraesCS4B01G366800.1 | Wheat | plastid | 52.89 | 50.96 |
| TraesCS4D01G360900.1 | Wheat | cytosol | 53.78 | 50.1 |
| VIT_00s0233g00170.t01 | Wine grape | cytosol | 27.78 | 50.0 |
| TraesCS5A01G534500.1 | Wheat | cytosol | 51.78 | 49.47 |
| HORVU7Hr1G027520.8 | Barley | endoplasmic reticulum, extracellular, golgi | 33.56 | 48.24 |
| HORVU6Hr1G061340.1 | Barley | mitochondrion | 20.67 | 47.94 |
| TraesCS5A01G536300.1 | Wheat | cytosol | 9.11 | 46.07 |
| TraesCS5A01G536500.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 53.78 | 45.4 |
| AT5G07800.1 | Thale cress | cytosol | 45.78 | 44.78 |
| AT5G61290.1 | Thale cress | cytosol | 45.78 | 44.69 |
| HORVU6Hr1G094480.7 | Barley | plastid | 34.44 | 43.18 |
| HORVU2Hr1G026400.29 | Barley | cytosol | 12.89 | 42.34 |
| Zm00001d046637_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 10.44 | 38.84 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | EntrezGene:842559 | EntrezGene:842643 | ProteinID:AAD43619.1 | ProteinID:AAF19700.1 |
| ProteinID:AAG52151.1 | ProteinID:AEE33987.1 | ProteinID:AEE34091.1 | ArrayExpress:AT1G62620 | EnsemblPlantsGene:AT1G62620 | RefSeq:AT1G62620 |
| TAIR:AT1G62620 | RefSeq:AT1G62620-TAIR-G | EnsemblPlants:AT1G62620.1 | TAIR:AT1G62620.1 | EMBL:BX815465 | InterPro:FAD/NAD-bd_sf |
| InterPro:Flavin_mOase | InterPro:Flavin_mOase-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 |
| GO:GO:0004499 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0050660 |
| GO:GO:0050661 | GO:GO:0055114 | InterPro:IPR036188 | RefSeq:NP_176450.2 | RefSeq:NP_176526.1 | PFAM:PF00743 |
| PIRSF:PIRSF000332 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025281 | PRINTS:PR00370 |
| PANTHER:PTHR23023 | PANTHER:PTHR23023:SF198 | UniProt:Q9SXD5 | SUPFAM:SSF51905 | UniParc:UPI00001970F6 | : |
Description
Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
Coordinates
chr1:+:23182644..23185151
Molecular Weight (calculated)
51258.7 Da
IEP (calculated)
6.464
GRAVY (calculated)
-0.411
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.