Factsheet for VIT_02s0154g00160.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	26.26	93.5
VIT_00s0233g00130.t01	Wine grape	plastid	42.92	89.1
VIT_02s0154g00190.t01	Wine grape	cytosol	66.67	63.9
VIT_02s0154g00170.t01	Wine grape	vacuole	65.75	63.86
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	65.98	63.52
VIT_00s0233g00180.t01	Wine grape	cytosol	65.53	62.8
VIT_18s0075g00690.t01	Wine grape	cytosol	13.47	57.84
Bra036655.1-P	Field mustard	plastid	13.24	56.86
KRH28040	Soybean	peroxisome, plastid	58.9	56.46
AT1G62600.1	Thale cress	mitochondrion, plastid	56.39	54.65
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	56.85	54.61
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	56.62	54.51
CDY31816	Canola	plastid	55.48	54.24
Zm00001d029865_P001	Maize	mitochondrion	54.34	54.09
AT1G62620.1	Thale cress	cytosol	55.48	54.0
CDY27695	Canola	plastid	29.68	53.94
CDY15973	Canola	plastid	57.08	53.88
AT1G63370.1	Thale cress	plastid	55.25	53.78
CDY68139	Canola	mitochondrion	55.02	53.67
Bra026986.1-P	Field mustard	plastid	56.85	53.66
CDY26543	Canola	plastid	56.85	53.66
AT1G63390.1	Thale cress	mitochondrion	20.55	53.57
CDY21037	Canola	plastid	54.79	53.57
GSMUA_Achr11P...	Banana	plastid	51.83	53.04
AT1G12140.1	Thale cress	mitochondrion	55.48	52.94
CDY31244	Canola	plastid	54.11	52.9
HORVU6Hr1G029800.7	Barley	mitochondrion	50.0	52.9
Bra019747.1-P	Field mustard	cytosol	55.94	52.8
EER91959	Sorghum	mitochondrion	53.42	52.58
AT1G12200.1	Thale cress	cytosol	55.71	52.47
Solyc06g060610.2.1	Tomato	mitochondrion	57.08	52.41
Bra027032.1-P	Field mustard	cytosol	50.46	52.37
CDY68140	Canola	plastid	50.46	52.37
TraesCS6A01G150100.1	Wheat	mitochondrion	21.69	51.91
TraesCS4D01G360800.1	Wheat	cytosol	37.67	51.89
CDY39802	Canola	plastid	14.84	51.18
AT1G63340.1	Thale cress	plastid	49.54	51.18
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	42.01	50.55
Bra026988.1-P	Field mustard	plastid	52.97	50.54
VIT_00s0233g00170.t01	Wine grape	cytosol	28.77	50.4
CDY15969	Canola	plastid	52.74	50.33
Bra027035.1-P	Field mustard	plastid	52.97	50.33
CDY26541	Canola	plastid	52.51	50.11
CDY12955	Canola	extracellular, plastid	52.97	50.11
Bra016787.1-P	Field mustard	plastid	54.34	50.11
CDY31817	Canola	cytosol	29.68	50.0
CDY31813	Canola	plastid	52.28	49.67
TraesCS4B01G370200.1	Wheat	mitochondrion	52.28	49.46
TraesCS4D01G361000.1	Wheat	cytosol	52.05	49.46
OQU92170	Sorghum	cytosol	41.55	49.32
CDY72131	Canola	cytosol	33.1	49.32
CDX98082	Canola	cytosol	33.1	49.15
TraesCS1A01G210600.1	Wheat	cytosol	40.64	49.04
AT1G62570.1	Thale cress	cytosol	51.6	49.02
TraesCS5A01G536600.1	Wheat	cytosol, peroxisome, plastid	36.99	48.94
AT1G12130.1	Thale cress	plastid	52.51	48.94
AT1G62560.1	Thale cress	plastid	51.37	48.7
HORVU6Hr1G061340.1	Barley	mitochondrion	21.46	48.45
AT1G62580.1	Thale cress	cytosol, plastid	54.79	48.29
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	50.46	48.15
HORVU4Hr1G087900.7	Barley	cytosol, peroxisome	42.47	47.94
VIT_13s0019g00660.t01	Wine grape	mitochondrion	50.23	47.93
Os10t0553800-01	Rice	peroxisome	52.74	47.93
TraesCS6D01G139800.1	Wheat	mitochondrion	49.09	47.78
HORVU1Hr1G091130.12	Barley	cytosol, mitochondrion, peroxisome, plastid	51.37	47.77
TraesCS4B01G370500.1	Wheat	mitochondrion	48.4	47.75
VIT_13s0019g00620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.54	47.59
HORVU1Hr1G053900.1	Barley	cytosol, peroxisome	52.51	47.23
TraesCS4B01G366800.1	Wheat	plastid	50.23	47.11
AT1G12160.1	Thale cress	cytosol, mitochondrion	50.23	47.01
TraesCS1D01G213900.2	Wheat	peroxisome	52.97	46.77
CDX98777	Canola	cytosol, peroxisome, plasma membrane	29.68	46.59
TraesCS5A01G534500.1	Wheat	cytosol	49.77	46.28
TraesCS1B01G224600.2	Wheat	cytosol	52.51	46.28
TraesCS4B01G370400.1	Wheat	mitochondrion	49.77	46.19
TraesCS4D01G360900.1	Wheat	cytosol	50.68	45.96
AT1G62540.2	Thale cress	cytosol	50.46	45.85
GSMUA_Achr2P18520_001	Banana	cytosol	39.73	45.79
CDY03270	Canola	cytosol	37.21	45.66
Zm00001d027286_P001	Maize	cytosol	39.27	44.91
KXG40414	Sorghum	cytosol	39.04	44.42
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	45.43	43.83
HORVU2Hr1G026400.29	Barley	cytosol	13.7	43.8
HORVU4Hr1G031220.3	Barley	mitochondrion, peroxisome	25.57	42.59
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	11.42	41.32
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	50.0	41.09
VIT_00s0131g00120.t01	Wine grape	cytosol	23.52	39.46
HORVU7Hr1G027520.8	Barley	endoplasmic reticulum, extracellular, golgi	27.85	38.98
HORVU6Hr1G094480.7	Barley	plastid	31.51	38.44
TraesCS5A01G536300.1	Wheat	cytosol	4.34	21.35
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	45.89	18.86

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	ProteinID:CBI31892.3	ncoils:Coil	UniProt:D7TN19	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF198	SUPFAM:SSF51905	UniParc:UPI0001BE3ABE	ArrayExpress:VIT_02s0154g00160	EnsemblPlantsGene:VIT_02s0154g00160
EnsemblPlants:VIT_02s0154g00160.t01	SEG:seg	:	:	:	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:D7TN19]

Coordinates

chr2:-:4952235..4956004

Molecular Weight (calculated)

45391.1 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.220

Length

438 amino acids

Sequence
(BLAST)

001: MSSCNVAVIG AGPAGLVAAR ELRREGHKAV VFERQAQVGG TWVYQPSVEA DPLASDPSRP IVHSSLYPSL RTNLPREVMG FRDYPFLSTG LAHRDSRRFP
101: GHREVLHFIN DFTTEFGLID LIRFETEVVY TGLGADGKWR LRSRGANDEE VDEIFDAVVV CNGHHTEPRI AEIHGIDAWP GKQIHSHNYR IPEPFRDQVV
201: ILIGNAFSAD DISRDIAQVA KEVHVATRSE ENSMLGKRPG YDNMWLHSTV ESVHRDGTVI FQDGSGVLAD VIMHCTGYKY YFPFLDTNGI VTVDDNRVGP
301: LYKHVFPPAL APGLSFVGLP WMAPLFAVLE LQSQWIAGVL SGRIGLPSQE EMMKDVEAFY LSLEASGTPK RYTHKIGDYE XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXQRHIVM NGTMRTWCWK LRRTFLSK

Best Arabidopsis Sequence Match ( AT1G62620.2 )
(BLAST)

001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QV

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.