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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:secretory
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98777 Canola cytosol, peroxisome, plasma membrane 62.47 79.93
CDY31817 Canola cytosol 52.66 72.31
CDY27691 Canola cytosol 25.77 65.71
VIT_00s0233g00120.t01 Wine grape cytosol, peroxisome, vacuole 22.13 64.23
CDY31816 Canola plastid 75.35 60.04
CDY68140 Canola plastid 70.31 59.48
CDY68139 Canola mitochondrion 74.23 59.02
CDY72131 Canola cytosol 44.82 54.42
CDX98082 Canola cytosol 44.82 54.24
Bra036655.1-P Field mustard plastid 14.57 50.98
TraesCS1A01G210600.1 Wheat cytosol 51.54 50.69
VIT_00s0233g00170.t01 Wine grape cytosol 35.29 50.4
TraesCS5A01G536600.1 Wheat cytosol, peroxisome, plastid 46.22 49.85
CDY39802 Canola plastid 17.65 49.61
OQU92170 Sorghum cytosol 51.26 49.59
HORVU4Hr1G031220.3 Barley mitochondrion, peroxisome 36.41 49.43
CDY27695 Canola plastid 33.05 48.96
TraesCS5A01G536300.1 Wheat cytosol 11.76 47.19
GSMUA_Achr2P18520_001 Banana cytosol 49.58 46.58
Zm00001d027286_P001 Maize cytosol 49.58 46.21
VIT_18s0075g00690.t01 Wine grape cytosol 13.17 46.08
TraesCS4D01G360800.1 Wheat cytosol 40.62 45.6
KXG40414 Sorghum cytosol 48.74 45.19
HORVU4Hr1G087900.7 Barley cytosol, peroxisome 49.02 45.1
KRH28040 Soybean peroxisome, plastid 57.7 45.08
CDY15973 Canola plastid 58.54 45.04
CDY26543 Canola plastid 57.7 44.4
GSMUA_Achr11P... Banana plastid 52.66 43.93
PGSC0003DMT400035866 Potato cytosol, peroxisome, plastid 55.74 43.74
Zm00001d029865_P001 Maize mitochondrion 53.78 43.64
CDY21037 Canola plastid 54.34 43.3
CDY31244 Canola plastid 54.34 43.3
EER91959 Sorghum mitochondrion 53.78 43.15
HORVU7Hr1G027520.8 Barley endoplasmic reticulum, extracellular, golgi 37.82 43.13
VIT_02s0154g00190.t01 Wine grape cytosol 54.9 42.89
Solyc06g060610.2.1 Tomato mitochondrion 56.86 42.56
VIT_00s0233g00180.t01 Wine grape cytosol 54.34 42.45
VIT_02s0154g00170.t01 Wine grape vacuole 53.22 42.13
PGSC0003DMT400043245 Potato cytosol, peroxisome, plastid 53.5 41.89
CDY12955 Canola extracellular, plastid 53.5 41.25
CDY26541 Canola plastid 52.66 40.96
HORVU6Hr1G094480.7 Barley plastid 40.9 40.67
CDY15969 Canola plastid 52.1 40.52
CDY31813 Canola plastid 52.1 40.35
VIT_02s0154g00180.t01 Wine grape cytosol, peroxisome, vacuole 50.7 39.78
Os10t0553800-01 Rice peroxisome 53.5 39.63
TraesCS6D01G139800.1 Wheat mitochondrion 49.58 39.33
TraesCS4D01G361000.1 Wheat cytosol 49.58 38.39
TraesCS4B01G370500.1 Wheat mitochondrion 47.62 38.29
TraesCS4B01G370200.1 Wheat mitochondrion 49.58 38.23
HORVU6Hr1G029800.7 Barley mitochondrion 44.26 38.16
HORVU1Hr1G053900.1 Barley cytosol, peroxisome 51.82 37.99
HORVU1Hr1G091130.12 Barley cytosol, mitochondrion, peroxisome, plastid 49.58 37.58
TraesCS1D01G213900.2 Wheat peroxisome 51.82 37.3
TraesCS1B01G224600.2 Wheat cytosol 51.82 37.22
VIT_02s0154g00160.t01 Wine grape cytosol, peroxisome 45.66 37.21
TraesCS4B01G370400.1 Wheat mitochondrion 49.02 37.08
TraesCS4B01G366800.1 Wheat plastid 47.9 36.62
TraesCS5A01G534500.1 Wheat cytosol 47.9 36.31
TraesCS4D01G360900.1 Wheat cytosol 49.02 36.23
CDY02158 Canola cytosol 40.62 36.16
CDY23072 Canola cytosol 40.62 36.16
CDY02157 Canola cytosol 43.14 33.33
CDY23071 Canola cytosol 42.86 33.12
CDX99030 Canola cytosol, mitochondrion, peroxisome, plastid 41.18 32.45
CDX69991 Canola cytosol, mitochondrion, peroxisome, plastid 40.9 32.23
TraesCS5A01G536500.2 Wheat cytosol, endoplasmic reticulum, plastid 47.9 32.08
CDY14028 Canola cytosol, mitochondrion, peroxisome, plastid 40.34 31.37
CDY40773 Canola mitochondrion 40.06 31.15
VIT_00s0233g00130.t01 Wine grape plastid 16.25 27.49
Zm00001d046637_P001 Maize cytosol, mitochondrion, peroxisome, plastid 9.24 27.27
HORVU2Hr1G026400.29 Barley cytosol 9.24 24.09
TraesCS6A01G150100.1 Wheat mitochondrion 10.92 21.31
HORVU6Hr1G061340.1 Barley mitochondrion 9.52 17.53
Protein Annotations
Gene3D:3.50.50.60MapMan:35.1GO:A0A078EMR8EnsemblPlants:CDY03270ProteinID:CDY03270ProteinID:CDY03270.1
InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOaseInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0050660GO:GO:0050661
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00115820001InterPro:IPR036188PFAM:PF00743PIRSF:PIRSF000332PRINTS:PR00370
PANTHER:PTHR23023PANTHER:PTHR23023:SF198SUPFAM:SSF51905UniParc:UPI0004EC0626::
Description
BnaC09g10780D
Coordinates
chrLK031942:+:225304..226831
Molecular Weight (calculated)
40962.8 Da
IEP (calculated)
6.196
GRAVY (calculated)
-0.280
Length
357 amino acids
Sequence
(BLAST)
001: MGFIDFPFVI RPGKSRDPRR FPSHGEVVAY LQDFAEEFAI EEMIRFETTV ERVSPAEESD GEGGITKWRI EFTEKEEKVR RQELYDAVVV WIRSWPGKEM
101: HSHNYRIPEP FKEQVVVLIG SSASAVDISR DIVGVAKEVH VASWSNAADA FIKQNGHTNL WMHSMIERVH EDGSVVFQNG KTILAHVIMH CTGYKYHFPF
201: LETNGSVTVN DNCVGPLYKH IFSPAFAPSL SFVGITWKVL PFHLFELQSK WIAGVLSGRI TLPSKEDMMV EIKTEYATLE AQGIPKRYTH CLGISQFEYF
301: DGLASQCGCS GTEKWRKEMC LTSFMRVMKH PETYRDEWED HHLVSQAYQD FSLYSSL
Best Arabidopsis Sequence Match ( AT1G62600.1 )
(BLAST)
001: MAPSLSPIRS HHVAVIGAGA AGLVAARELR REGHSVVVFE RQKQVGGTWI YTDHIEPDPL SVDPTRSVVH SSVYGSLRTN LPRECMGYRD FPFVIRSDVS
101: ESRDPRRFPS HGEVLAYLQD FAKEFAIEEM IRFDTAVVKV APAAEEGSGK WRIESTEKEK KVLRDEIYDA VVVCNGHYIE PRHAEIPGIS SWPGKEMHSH
201: NYRIPEPFRD QVVVLIGNSA SADDISRDIA RVAKEVHVAC RSNAADTYIE RPGYSNLWMH SMIESVHEDG SVVFQNGKTI SVDVIMHCTG YKYHFPFLET
301: NGNVTVDDNR VGPLYKDVFS PAFAPWLSFV GIPWKVVPFP MFELQSKWIA GVLSGRIPLP SKEDMMMEIK TLYSTLDAQG IAKRYTHQMG ISQFEYNSWL
401: ASQCGCSETE EWRKEMYFAT GVKKRAHPET YRDEWDDHHL VSQAYQDFSL YT
Arabidopsis Description
Flavin-containing monooxygenase FMO GS-OX-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94BV5]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.