Factsheet for TraesCS4B01G370400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G360900.1	Wheat	cytosol	87.5	85.51
TraesCS4B01G366800.1	Wheat	plastid	77.33	78.16
TraesCS5A01G536500.2	Wheat	cytosol, endoplasmic reticulum, plastid	87.92	77.86
TraesCS4B01G370200.1	Wheat	mitochondrion	70.76	72.14
TraesCS4B01G370500.1	Wheat	mitochondrion	64.62	68.69
VIT_00s0233g00120.t01	Wine grape	cytosol, peroxisome, vacuole	16.74	64.23
Bra036655.1-P	Field mustard	plastid	12.5	57.84
KXG40414	Sorghum	cytosol	46.61	57.14
Zm00001d027286_P001	Maize	cytosol	45.55	56.14
GSMUA_Achr11P...	Banana	plastid	50.42	55.61
VIT_02s0154g00190.t01	Wine grape	cytosol	53.81	55.58
VIT_00s0233g00180.t01	Wine grape	cytosol	53.6	55.36
CDY31816	Canola	plastid	52.33	55.13
CDY68139	Canola	mitochondrion	52.12	54.79
TraesCS1B01G224600.2	Wheat	cytosol	57.63	54.73
CDY31817	Canola	cytosol	30.08	54.62
KRH28040	Soybean	peroxisome, plastid	52.75	54.49
CDY68140	Canola	plastid	48.31	54.03
Bra027033.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	41.53	53.85
PGSC0003DMT400035866	Potato	cytosol, peroxisome, plastid	51.91	53.85
Bra027032.1-P	Field mustard	cytosol	48.09	53.79
AT1G62620.1	Thale cress	cytosol	51.27	53.78
VIT_00s0233g00130.t01	Wine grape	plastid	23.94	53.55
AT1G62600.1	Thale cress	mitochondrion, plastid	51.27	53.54
AT1G63370.1	Thale cress	plastid	50.85	53.33
VIT_02s0154g00170.t01	Wine grape	vacuole	50.85	53.22
Bra026988.1-P	Field mustard	plastid	51.06	52.51
PGSC0003DMT400043245	Potato	cytosol, peroxisome, plastid	50.64	52.41
VIT_02s0154g00180.t01	Wine grape	cytosol, peroxisome, vacuole	50.42	52.31
CDY15969	Canola	plastid	50.85	52.29
CDY26541	Canola	plastid	50.85	52.29
CDY15973	Canola	plastid	51.27	52.16
CDY26543	Canola	plastid	51.06	51.94
CDY21037	Canola	plastid	49.15	51.79
CDY31244	Canola	plastid	49.15	51.79
Bra026986.1-P	Field mustard	plastid	50.85	51.72
AT1G12140.1	Thale cress	mitochondrion	50.21	51.63
Solyc06g060610.2.1	Tomato	mitochondrion	52.12	51.57
AT1G12200.1	Thale cress	cytosol	50.64	51.4
Bra027035.1-P	Field mustard	plastid	50.0	51.19
Bra019747.1-P	Field mustard	cytosol	50.21	51.08
CDY12955	Canola	extracellular, plastid	50.0	50.97
CDY31813	Canola	plastid	49.58	50.76
CDY72131	Canola	cytosol	31.57	50.68
CDX98082	Canola	cytosol	31.57	50.51
AT1G65860.1	Thale cress	cytosol, extracellular, plastid	48.94	50.33
GSMUA_Achr2P18520_001	Banana	cytosol	40.47	50.26
AT1G12130.1	Thale cress	plastid	49.79	50.0
VIT_02s0154g00160.t01	Wine grape	cytosol, peroxisome	46.19	49.77
AT1G63340.1	Thale cress	plastid	44.7	49.76
AT1G62570.1	Thale cress	cytosol	48.52	49.67
CDY39802	Canola	plastid	13.35	49.61
AT1G63390.1	Thale cress	mitochondrion	17.58	49.4
VIT_00s0233g00170.t01	Wine grape	cytosol	26.06	49.2
AT1G12160.1	Thale cress	cytosol, mitochondrion	48.73	49.15
Bra016787.1-P	Field mustard	plastid	49.36	49.05
CDY03270	Canola	cytosol	37.08	49.02
CDY27695	Canola	plastid	25.0	48.96
AT1G62560.1	Thale cress	plastid	47.46	48.48
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	12.29	47.93
AT1G62540.2	Thale cress	cytosol	48.73	47.72
CDX98777	Canola	cytosol, peroxisome, plasma membrane	27.75	46.95
TraesCS1B01G006000.1	Wheat	mitochondrion	39.83	46.53
AT1G62580.1	Thale cress	cytosol, plastid	48.73	46.28
VIT_18s0075g00690.t01	Wine grape	cytosol	9.75	45.1
TraesCS1B01G006200.1	Wheat	cytosol	40.25	42.6
TraesCS5B01G194300.1	Wheat	cytosol	41.95	41.68
TraesCS6B01G178800.1	Wheat	cytosol	42.8	41.65
TraesCS4B01G269700.1	Wheat	cytosol	41.95	40.0
TraesCS5B01G531000.1	Wheat	cytosol	41.31	39.39
TraesCS6B01G148900.1	Wheat	cytosol	42.16	38.87
TraesCS5B01G297400.1	Wheat	cytosol	35.81	36.58
TraesCS3B01G014100.2	Wheat	cytosol	40.04	36.49
TraesCS5B01G530900.1	Wheat	cytosol	39.83	36.29

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF199	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS4B01G370400	EnsemblPlants:TraesCS4B01G370400.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:656262565..656265588

Molecular Weight (calculated)

52016.8 Da

IEP (calculated)

5.945

GRAVY (calculated)

-0.114

Length

472 amino acids

Sequence
(BLAST)

001: MPSRRVAVIG AGAAGLVAAR ELRREGHAPA PVVFERAVGV GGTWRYDDAA SADPLGAGGV HGSLYASLRT NLPRESMGFL DFPFVADEGS IDPRRFPGHQ
101: EVLRYLETFA RRFDLLGLVR LQTEVVGVRR SRVDGVGAGA AGWTVSYCSR KLAGGELQEE EEQSEVFDAV VVCNGHFAEP LLADIAGIGG WPGKQLHSHS
201: YRVPDPFHGQ VVVVIGYHPS GMDISRDIAG VAKEVHVAIR AAPAEMQSAT AHANLWLHPM IECAEEDGSV VFQDGSRVKA DSIVHCTGYK YGFPFLEEDG
301: IVSVDNNRVG PLYKHVFPPQ LAPHISFIGL PFKLILFPVF RLQSNWVAGA LSGRIELPSP EEMMLDVMAF YSDMEARGWP KRFTHNLGVE AWTFEYQDWL
401: AEQCGLEKME EWRRVIYVAA RARVLVRPES YRDEWDDDQL VAQAHITSST ATYGLASVGF SSLRGHAIKE FR

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.