Factsheet for TraesCS5B01G530900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G033300.1	Wheat	cytosol	83.78	89.3
TraesCS5B01G531000.1	Wheat	cytosol	75.29	78.79
TraesCS5B01G297400.1	Wheat	cytosol	63.32	71.0
TraesCS5B01G194300.1	Wheat	cytosol	63.13	68.84
Os07t0112100-00	Rice	cytosol	59.27	60.2
TraesCS1B01G006000.1	Wheat	mitochondrion	46.53	59.65
TraesCS6B01G178800.1	Wheat	cytosol	55.79	59.59
TraesCS7D01G425900.1	Wheat	cytosol	55.6	59.14
TraesCS1B01G006200.1	Wheat	cytosol	50.58	58.74
TraesCS4B01G269700.1	Wheat	cytosol	55.98	58.59
Os02t0580600-01	Rice	cytosol	50.19	55.44
TraesCS3B01G014100.2	Wheat	cytosol	54.83	54.83
TraesCS6B01G148900.1	Wheat	cytosol	53.67	54.3
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	45.17	51.43
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	44.98	51.21
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	44.02	50.22
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	43.82	50.11
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	44.21	49.89
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	43.63	49.89
CDY40773	Canola	mitochondrion	43.82	49.46
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	43.82	49.24
Bra028683.1-P	Field mustard	mitochondrion	43.44	49.02
AT5G07800.1	Thale cress	cytosol	43.44	48.91
Bra012970.1-P	Field mustard	cytosol	41.89	48.55
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.62	48.25
AT5G61290.1	Thale cress	cytosol	42.86	48.16
Bra012971.1-P	Field mustard	cytosol	42.66	48.04
CDY02157	Canola	cytosol	42.47	47.62
CDY23071	Canola	cytosol	42.47	47.62
CDY02158	Canola	cytosol	35.91	46.38
CDY23072	Canola	cytosol	35.52	45.89
TraesCS4B01G370400.1	Wheat	mitochondrion	36.29	39.83
TraesCS4B01G370500.1	Wheat	mitochondrion	33.78	39.41
TraesCS4B01G370200.1	Wheat	mitochondrion	34.56	38.66
TraesCS4B01G366800.1	Wheat	plastid	34.56	38.33
TraesCS1B01G224600.2	Wheat	cytosol	36.1	37.63
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	45.37	22.05

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS5B01G530900	EnsemblPlants:TraesCS5B01G530900.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:689315498..689317054

Molecular Weight (calculated)

57260.7 Da

IEP (calculated)

5.380

GRAVY (calculated)

-0.321

Length

518 amino acids

Sequence
(BLAST)

001: MAAGDGEPVL QLKSVCVVGA GMAGLAAARE LRREGHAVTV MEQSSDVGGQ WLYDPRTDVV DPLGAVEPVR VPSSIYACLR LTSPREVMGF SDFQFLPREG
101: AGRDLRRYPG HRELHCYLRN FCDAFGLMDA VKLDTRVLRV APVAMSMSTT TRRWAVRSVR RLSGTDDDDD AGKDEEVFDA VVVATGNYAQ RMLPSDIQGM
201: GEWRRRQLHS HSYRTPVPFH DEAVVVVGCG ASGKDIALDL GRVAREVHLA ASSEAEAATP AMSRMLANHG DVLRLHPRVR QLHTDGQVEF TDGSSVMADT
301: VIYCTGYAYS FPFLDTGGAV TVSDDGYVVG PLFEHVFPPS LAPTLSFVGV PRKVLIPWFF EVQARWVAQV LSGRRTLPSE DQMLRSVEEQ LRAREAAGVA
401: RKHTHNIASV EPRDMYEFGE KYCDFTPTEE WKKELILSSN ASMDDDVETF RDRAADDSEK VRKGVQGWLG GLVAQAQEET AVKTEDSQAH EARQAPGLTN
501: RDQWAHGFRF VTEPELMG

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.