Factsheet for TraesCS5B01G531000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G033200.1	Wheat	cytosol	49.7	92.48
TraesCS5B01G530900.1	Wheat	cytosol	78.79	75.29
TraesCS5B01G297400.1	Wheat	cytosol	65.66	70.35
TraesCS5B01G194300.1	Wheat	cytosol	66.06	68.84
Os07t0112100-00	Rice	cytosol	63.23	61.37
TraesCS1B01G006000.1	Wheat	mitochondrion	49.49	60.64
TraesCS7D01G425900.1	Wheat	cytosol	59.6	60.57
TraesCS4B01G269700.1	Wheat	cytosol	59.6	59.6
TraesCS6B01G178800.1	Wheat	cytosol	58.18	59.38
TraesCS1B01G006200.1	Wheat	cytosol	52.93	58.74
TraesCS3B01G014100.2	Wheat	cytosol	57.98	55.41
TraesCS6B01G148900.1	Wheat	cytosol	56.97	55.08
Os02t0580600-01	Rice	cytosol	51.92	54.8
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	47.68	51.87
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	47.47	51.65
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	46.87	51.1
Bra012970.1-P	Field mustard	cytosol	45.86	50.78
CDY23071	Canola	cytosol	46.87	50.22
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	45.86	50.11
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	45.66	49.89
CDY02157	Canola	cytosol	46.46	49.78
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	46.06	49.67
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	45.86	49.24
CDY40773	Canola	mitochondrion	45.66	49.24
Bra012971.1-P	Field mustard	cytosol	45.66	49.13
Bra028683.1-P	Field mustard	mitochondrion	45.25	48.8
AT5G07800.1	Thale cress	cytosol	45.25	48.7
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.11	48.25
AT5G61290.1	Thale cress	cytosol	44.85	48.16
CDY02158	Canola	cytosol	38.38	47.38
CDY23072	Canola	cytosol	38.18	47.13
TraesCS4B01G370400.1	Wheat	mitochondrion	39.39	41.31
TraesCS4B01G370200.1	Wheat	mitochondrion	38.38	41.04
TraesCS4B01G366800.1	Wheat	plastid	38.59	40.9
TraesCS4B01G370500.1	Wheat	mitochondrion	36.57	40.77
TraesCS1B01G224600.2	Wheat	cytosol	38.99	38.83
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	47.47	22.05

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS5B01G531000	EnsemblPlants:TraesCS5B01G531000.1	SEG:seg

Description

No Description!

Coordinates

chr5B:-:689330279..689331766

Molecular Weight (calculated)

54381.8 Da

IEP (calculated)

5.459

GRAVY (calculated)

-0.198

Length

495 amino acids

Sequence
(BLAST)

001: MAAGDGEPVL QSKSVCVVGG GMAGLAAARE LRREGHAVTV MEQSSDVGGQ WLYDPRTDVE DPLGAVAPVR VPSSIYSCLR LISPREAIGF SDFQFLPSQG
101: AGRDPRRFPG HREMHCYLQD FCDAFGLMDA VRLNTRVLRV ALAAMSTSKA KATHRWAVRS VRRLHGTDEY DDDAEEDEEL FDAVVVATGH YAQPMLPSGI
201: QGMGEWRRRQ LHSHSYRTPE PFRGEAMVVV GGGDSGKDIA LDLCHVAREV HLAASSEVAT PAMLRMLANH GDVLRLHPRI RQLHADGRVE FADGSSVVAD
301: TVIYCTGYAY SFPFLDTGGA VTVGDNGYVV GPLFEHVFPP SLAPTLSFVG VPRKIPIPWF LEVQARWVAQ VLSGRRELPP EEEMLRCVEE NLCAREAAGV
401: PRKLTHNIGG IEPHAIFEFG EKYCDIAPLE EWKKELMVSS VVSMMDDVET FRDLANDSEN VHKGLQEWRL GAAALLKVKQ NRPITTPVDT EGDGL

Best Arabidopsis Sequence Match ( AT1G62620.1 )
(BLAST)

001: MAPALSPTRS HHVAVIGAGP AGLVAARELR REGHSVVVFE KQKQVGGTWI YTDEVESDPL SVDPTRSVVH SSVYRSLRIN GTRECTGYRD FPFVVRSGVS
101: RDPRRFPSHG EVLAYLKDFA KEFGIEEMVR FETEVVKVSP AAEEGIGKWR IESTEKEKKV RRDEIYDAVV VCNGHYVEPR LAQIPGISSW PGKEMHSHNY
201: RIPEPFRDKV VVLIGNSSSA EDISRDIARV AKEVHVACRS NPADTFIKQT GYNNLWTHSM IESVHEDGSV VYQNGKTISV DIIMHCTGYK YHFPFLDTNG
301: IVTVDDNRVG PLYKDVFPPA FAPWLSFIGI PWQVLPFPMF ELQSKWIAGV LSGRIPLPSK EDMMIEIKTF YSTLEVQGIP KRYTHRMGNT QFEYYNWLAS
401: QCGCSETEEW RKEMCLANGV RKEAHPETYR DEWDDHHLVS EAYQDFSLYS

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.