Factsheet for TraesCS5B01G297400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G078450.1	Barley	cytosol	44.59	73.57
TraesCS5A01G298300.1	Wheat	cytosol	76.41	71.89
TraesCS5B01G531000.1	Wheat	cytosol	70.35	65.66
TraesCS5B01G194300.1	Wheat	cytosol	65.58	63.79
TraesCS5B01G530900.1	Wheat	cytosol	71.0	63.32
TraesCS1B01G006000.1	Wheat	mitochondrion	48.7	55.69
TraesCS6B01G178800.1	Wheat	cytosol	57.36	54.64
Os07t0112100-00	Rice	cytosol	60.17	54.51
Os02t0580600-01	Rice	cytosol	54.76	53.94
TraesCS1B01G006200.1	Wheat	cytosol	51.52	53.36
TraesCS4B01G269700.1	Wheat	cytosol	56.71	52.93
TraesCS7D01G425900.1	Wheat	cytosol	54.76	51.95
TraesCS3B01G014100.2	Wheat	cytosol	55.84	49.81
TraesCS6B01G148900.1	Wheat	cytosol	55.19	49.8
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	45.89	46.59
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	45.67	46.37
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	44.16	44.93
Bra012970.1-P	Field mustard	cytosol	43.29	44.74
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	43.72	44.59
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	43.51	44.37
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	43.94	44.23
CDY23071	Canola	cytosol	44.16	44.16
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	43.72	43.82
CDY40773	Canola	mitochondrion	43.51	43.79
CDY02157	Canola	cytosol	43.72	43.72
Bra028683.1-P	Field mustard	mitochondrion	43.29	43.57
AT5G07800.1	Thale cress	cytosol	43.29	43.48
AT5G61290.1	Thale cress	cytosol	43.29	43.38
Bra012971.1-P	Field mustard	cytosol	43.07	43.26
CDY02158	Canola	cytosol	37.01	42.64
CDY23072	Canola	cytosol	36.58	42.14
TraesCS4B01G370500.1	Wheat	mitochondrion	35.28	36.71
TraesCS4B01G370400.1	Wheat	mitochondrion	36.58	35.81
TraesCS4B01G366800.1	Wheat	plastid	35.5	35.12
TraesCS4B01G370200.1	Wheat	mitochondrion	34.85	34.77
TraesCS1B01G224600.2	Wheat	cytosol	35.06	32.6
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	6.93	28.07
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	45.67	19.79

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00370
PANTHER:PTHR23023	PANTHER:PTHR23023:SF159	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS5B01G297400	EnsemblPlants:TraesCS5B01G297400.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:480165281..480166766

Molecular Weight (calculated)

50987.1 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.342

Length

462 amino acids

Sequence
(BLAST)

001: MEQSGDVGGQ WLYDPGTDGR VPSSVYACLR LLSPREAMGF SDFEFLPRAG AGRDPRRFPG HREVHSYLRD FCHAFGLMDA VRLNTRVLRV AIADPTSAAT
101: RQWAVRSVRR LGGTEDDARE EEEVFDAVVV ATGQYSQPML PSGIEGMAEW RLRQLHSHSY RTPEPFRGEA VVVVGCRDSG KDIALDLCRV AREVHLAASS
201: EAAAPTPAVS KMLANHGDVL RLHPRVRRLH ADGRVWFEDG SSVVADTVIY CTGYGYSFPF LDTGGAVTVG DGDCVVGPLF EHVFPPSLAP SLSFVGVPRK
301: VLLPWFFEAQ ARWVAQALSG RRALPPEAEM LRAVEEHFRA REAAGEPRKH THHYIGGIDY GDLTPMEDWK KELVLSSMAS MSDDLETFRD RADDSENVRK
401: GVRRWRGGLA AQAQDKTVAA AAEVEGDWQA MAKKERNSST ELNCTSSSIS EGMFNVLTSH LN

Best Arabidopsis Sequence Match ( AT1G12140.1 )
(BLAST)

001: MAPARTRVNS LNVAVIGAGA AGLVAARELR RENHTVVVFE RDSKVGGLWV YTPNSEPDPL SLDPNRTIVH SSVYDSLRTN LPRECMGYRD FPFVPRPEDD
101: ESRDSRRYPS HREVLAYLED FAREFKLVEM VRFKTEVVLV EPEDKKWRVQ SKNSDGISKD EIFDAVVVCN GHYTEPRVAH VPGIDSWPGK QIHSHNYRVP
201: DQFKDQVVVV IGNFASGADI SRDITGVAKE VHIASRSNPS KTYSKLPGSN NLWLHSMIES VHEDGTIVFQ NGKVVQADTI VHCTGYKYHF PFLNTNGYIT
301: VEDNCVGPLY EHVFPPALAP GLSFIGLPWM TLQFFMFELQ SKWVAAALSG RVTLPSEEKM MEDVTAYYAK REAFGQPKRY THRLGGGQVD YLNWIAEQIG
401: APPGEQWRYQ EINGGYYRLA TQSDTFRDKW DDDHLIVEAY EDFLRQKLIS SLPSQLLES

Arabidopsis Description

FMOGS-OX5Flavin-containing monooxygenase FMO GS-OX5 [Source:UniProtKB/Swiss-Prot;Acc:A8MRX0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.