Factsheet for TraesCS6B01G148900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G110500.1	Wheat	cytosol	82.81	88.89
TraesCS6A01G120500.2	Wheat	cytosol	82.23	87.34
TraesCS1B01G006000.1	Wheat	mitochondrion	63.67	80.69
TraesCS1B01G006200.1	Wheat	cytosol	68.75	78.92
TraesCS6B01G178800.1	Wheat	cytosol	74.41	78.56
TraesCS4B01G269700.1	Wheat	cytosol	66.41	68.69
TraesCS5B01G194300.1	Wheat	cytosol	59.77	64.42
TraesCS3B01G014100.2	Wheat	cytosol	64.84	64.09
TraesCS5B01G531000.1	Wheat	cytosol	55.08	56.97
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	50.59	56.92
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	50.59	56.92
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	49.22	55.51
TraesCS5B01G297400.1	Wheat	cytosol	49.8	55.19
Bra012970.1-P	Field mustard	cytosol	47.66	54.59
CDY23071	Canola	cytosol	48.44	53.68
TraesCS5B01G530900.1	Wheat	cytosol	54.3	53.67
CDY02157	Canola	cytosol	48.24	53.46
Bra012971.1-P	Field mustard	cytosol	47.85	53.26
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	47.66	53.16
CDY23072	Canola	cytosol	41.41	52.87
CDY02158	Canola	cytosol	41.41	52.87
AT5G07800.1	Thale cress	cytosol	47.46	52.83
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	46.68	52.76
CDY40773	Canola	mitochondrion	47.27	52.72
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	46.48	52.54
Bra028683.1-P	Field mustard	mitochondrion	47.07	52.51
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	46.88	52.06
AT5G61290.1	Thale cress	cytosol	46.68	51.84
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.74	48.25
TraesCS4B01G370500.1	Wheat	mitochondrion	38.48	44.37
TraesCS4B01G370200.1	Wheat	mitochondrion	39.06	43.2
TraesCS4B01G370400.1	Wheat	mitochondrion	38.87	42.16
TraesCS4B01G366800.1	Wheat	plastid	37.89	41.54
TraesCS1B01G224600.2	Wheat	cytosol	38.87	40.04
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	48.44	23.26

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS6B01G148900	EnsemblPlants:TraesCS6B01G148900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:149730344..149732150

Molecular Weight (calculated)

56830.8 Da

IEP (calculated)

5.396

GRAVY (calculated)

-0.210

Length

512 amino acids

Sequence
(BLAST)

001: MVCDDIKIKP LQRQKVCVIG AGMAGLASAR ELRREGHDVT VLEQSGDVGG QWVYDPRTDG ADPLGAAAPV KVHGSMYASL RLISARENMG FTDFQFAPKD
101: GRDGRRFPGH REVYLYLKDF CAAFGLMESV RLNTSVVRVA PAPGPARQWT VRSVDLGKSE EVVEEVFDAV VVANGHYSQP RLPSIQGMEA WRGRQMHSHS
201: YRVPEPFRGE VVVVVGCGES GKDITMEVRR VAKEVHLAAK SMEEVTQGLA KACLPSTPPA CTYNCTYVLF RAPVMSISTC MHTCMQNEMI DPSGNVNQVE
301: RLCEDGRVVF GDGSSILADT IIYCTGFSYS FPFLDTEGAV TVDDNRVGPL FEHVFPPSLA PSLSFIGIPI KVFAPWFFEA QAKWVAQVLS GKRTLPPEEE
401: MMRSVEEYYG AREIAGVPKK YTHDVSLFDT TYIDEFGGKY CDFPGVEKWR YELLVSSFVT MLDNLETFLD EYKDSDSIRK SVEEWRLSAQ QAQAATRAAT
501: KKQSLGLLEQ AQ

Best Arabidopsis Sequence Match ( AT1G62560.1 )
(BLAST)

001: MAPAQNQITS KHVAVIGAGP AGLITSRELR REGHSVVVFE REKQVGGLWV YTPKSDSDPL SLDPTRSKVH SSIYESLRTN VPRESMGVRD FPFLPRFDDE
101: SRDARRYPNH REVLAYIQDF AREFKIEEMI RFETEVVRVE PVDNGNWRVQ SKNSGGFLED EIYDAVVVCN GHYTEPNIAH IPGIKSWPGK QIHSHNYRVP
201: DPFENEVVVV IGNFASGADI SRDIAKVAKE VHIASRAREP HTYEKISVPQ NNLWMHSEID TTHEDGSIVF KNGKVIFADS IVYCTGYKYN FPFLETNGYL
301: RIDEKRVEPL YKHVFPPALA PGLAFVGLPA MGIVFVMFEI QSKWVAAVLS GRVTLPSTDK MMEDINAWYA SLDALGIPKR HTHTIGRIQS EYLNWVAKES
401: GCELVERWRG QEVDGGYLRL VAHPETYRDE WDDDELIEEA YNDFSRKKLI SVDPSYYLEN GR

Arabidopsis Description

FMOGS-OX3Flavin-containing monooxygenase FMO GS-OX3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXE1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.