Factsheet for TraesCS5B01G194300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G201500.1
TraesCS5B01G200200.1
TraesCS5D01G207800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	TraesCS5A01G201500.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5B01G200200.1	AT2G19560.1	19843313
AT5G61290.1	TraesCS5D01G207800.1	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G006000.1	Wheat	mitochondrion	57.05	67.08
TraesCS5B01G531000.1	Wheat	cytosol	68.84	66.06
TraesCS5B01G297400.1	Wheat	cytosol	63.79	65.58
Os07t0112100-00	Rice	cytosol	70.32	65.49
TraesCS6B01G178800.1	Wheat	cytosol	65.89	64.54
TraesCS1B01G006200.1	Wheat	cytosol	60.42	64.35
TraesCS5B01G530900.1	Wheat	cytosol	68.84	63.13
TraesCS4B01G269700.1	Wheat	cytosol	64.42	61.82
TraesCS7D01G425900.1	Wheat	cytosol	62.53	60.99
Os02t0580600-01	Rice	cytosol	60.0	60.77
TraesCS6B01G148900.1	Wheat	cytosol	64.42	59.77
TraesCS3B01G014100.2	Wheat	cytosol	62.74	57.53
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	51.16	53.41
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	50.95	53.19
Bra012970.1-P	Field mustard	cytosol	48.84	51.9
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	49.26	51.66
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	49.26	51.54
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	49.05	51.43
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	49.68	51.42
CDY23071	Canola	cytosol	49.89	51.3
AT5G61290.1	Thale cress	cytosol	49.68	51.19
CDY02157	Canola	cytosol	49.68	51.08
CDY40773	Canola	mitochondrion	49.26	50.98
AT5G07800.1	Thale cress	cytosol	49.26	50.87
Bra012971.1-P	Field mustard	cytosol	49.26	50.87
Bra028683.1-P	Field mustard	mitochondrion	49.05	50.76
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	49.26	50.76
CDY02158	Canola	cytosol	42.32	50.12
CDY23072	Canola	cytosol	41.89	49.63
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	10.74	44.74
TraesCS4B01G370200.1	Wheat	mitochondrion	41.89	42.98
TraesCS4B01G370500.1	Wheat	mitochondrion	39.79	42.57
TraesCS4B01G366800.1	Wheat	plastid	41.68	42.4
TraesCS4B01G370400.1	Wheat	mitochondrion	41.68	41.95
TraesCS1B01G224600.2	Wheat	cytosol	40.84	39.03
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	50.95	22.7

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF159	SUPFAM:SSF51905	EnsemblPlantsGene:TraesCS5B01G194300	EnsemblPlants:TraesCS5B01G194300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:351147151..351148903

Molecular Weight (calculated)

53285.1 Da

IEP (calculated)

5.835

GRAVY (calculated)

-0.371

Length

475 amino acids

Sequence
(BLAST)

001: MVSAEPPLQL ESKNVCVVGA GMAGMAAARE LRREGHVVTV MEQRGDVGGQ WLYDPRTDDD GLLEAGAAPV RVHSSMYACL RLISPREAMG FSDFQFFPRE
101: GVAGRDPRRF PTHREVYCYL WEFCHAFGLA DAVRLHTRVT RVAAVPTSST HQWAVRTVHL GGTGTDEEEK EEVFDAVVVA TGHYSQPKLP TINGMEDWRR
201: RQLHSHSYRT PEPFRGEVVV MIGCGDSGKD IALDLRRVAK EVHLTAKSME EAMTPAMSKM LANHANLHLH PQIDRLYADG RVAFADGSSV DADTVMYCTG
301: YTYSFTFLDT GGAVTVDDNR VGPLFEHVFP PSLAPSLSFV GIPRKVLVPW FFEAQGKWVA QVLSGRRALP PEEEMLRSVE EYYRAREAAG VPKKYTHDIA
401: GVDPEKMYEF REKYCDFARI EDWKIELLVS IIANMNDDME TFRDREDDGE NVRKGLQRWH AAAAQAQDQN YGCCG

Best Arabidopsis Sequence Match ( AT1G12130.1 )
(BLAST)

001: MTPPPNSISS RNVAVIGAGA AGLVAARELR REGHTVTIFE RQKQVGGLWV CTPNVEPDLL SIDPDRTVVH SSVYQSLRTN LPRECMGYSD FPFVTRPDDE
101: SRDPRRYPDH REVMRYLQDF AKEFKIEEMI RFETEVFRVE PTAENSCKWR VQFRSSSGVS GEDIFDAVVI CNGHFTEPRL AHIPGIESWP GKQIHSHNYR
201: VSDPFKGQVV IVIGYQSSGS DISRDIAILA KEVHIAAKSD AYAKESSIYS NLHFHPTIDR VYEDGSVVFQ DGKLIFADAI VHCTGYKYCF PFLETKGYVN
301: VEDNRVGPLY KHVFPPALAP GLSFIGLPSM ALQFFMFEIQ SRWVASVLSG RVKLPSEEQM MEDVIAFYAK LKSLGIPKRF THFLTDPQWT PMFEKLKPHE
401: AVLISQSEYF NWIAEQCGCS SIERWREEQY NIAIKKDDDN FRDEWDDDDQ IIQEAYRDFA KFKPSKVWST

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWW3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.