Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61290.1 | CDY13554 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | CDY13555 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | CDY35873 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | CDY66989 | AT2G19560.1 | 19843313 |
| AT5G61290.1 | CDY67021 | AT2G19560.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012970.1-P | Field mustard | cytosol | 96.75 | 100.0 |
| CDY23071 | Canola | cytosol | 98.48 | 98.48 |
| CDY23072 | Canola | cytosol | 72.73 | 83.79 |
| CDY02158 | Canola | cytosol | 72.08 | 83.04 |
| AT5G61290.1 | Thale cress | cytosol | 82.03 | 82.21 |
| CDX69991 | Canola | cytosol, mitochondrion, peroxisome, plastid | 75.54 | 77.04 |
| CDX99030 | Canola | cytosol, mitochondrion, peroxisome, plastid | 75.54 | 77.04 |
| CDY40773 | Canola | mitochondrion | 75.11 | 75.6 |
| CDY14028 | Canola | cytosol, mitochondrion, peroxisome, plastid | 75.11 | 75.6 |
| PGSC0003DMT400063125 | Potato | cytosol, peroxisome, plastid | 69.7 | 70.77 |
| Solyc03g115560.2.1 | Tomato | cytosol, peroxisome, plastid | 69.48 | 70.55 |
| VIT_17s0000g06790.t01 | Wine grape | cytosol, peroxisome, plastid | 67.97 | 69.16 |
| KRH63273 | Soybean | cytosol, peroxisome, plastid | 67.1 | 67.54 |
| KRH54615 | Soybean | cytosol | 44.81 | 65.71 |
| KRH56869 | Soybean | cytosol | 65.37 | 65.51 |
| KRH56870 | Soybean | cytosol, nucleus, peroxisome | 64.29 | 64.99 |
| KRH56868 | Soybean | cytosol, peroxisome, plastid | 49.35 | 61.62 |
| TraesCS1B01G006000.1 | Wheat | mitochondrion | 49.78 | 56.93 |
| TraesCS6A01G150700.1 | Wheat | cytosol | 48.92 | 54.2 |
| TraesCS1B01G006200.1 | Wheat | cytosol | 51.08 | 52.91 |
| TraesCS6A01G120500.2 | Wheat | cytosol | 54.76 | 52.49 |
| TraesCS6D01G110500.1 | Wheat | cytosol | 53.46 | 51.78 |
| TraesCS6B01G178800.1 | Wheat | cytosol | 54.11 | 51.55 |
| TraesCSU01G030500.1 | Wheat | cytosol | 46.97 | 50.94 |
| OQU88310 | Sorghum | cytosol, mitochondrion | 46.54 | 50.59 |
| TraesCS4B01G269700.1 | Wheat | cytosol | 54.11 | 50.51 |
| TraesCS4D01G269000.1 | Wheat | cytosol | 53.46 | 49.7 |
| TraesCS5B01G194300.1 | Wheat | cytosol | 51.08 | 49.68 |
| TraesCS6D01G110300.1 | Wheat | cytosol | 53.68 | 49.3 |
| Os07t0112000-00 | Rice | cytosol | 50.87 | 49.06 |
| EER97845 | Sorghum | cytosol | 44.81 | 49.05 |
| TraesCS7D01G425900.1 | Wheat | cytosol | 51.08 | 48.46 |
| Zm00001d018652_P001 | Maize | endoplasmic reticulum | 50.0 | 48.43 |
| EER95747 | Sorghum | cytosol | 49.57 | 48.41 |
| TraesCS3A01G010900.1 | Wheat | cytosol | 52.6 | 48.41 |
| Zm00001d018650_P001 | Maize | cytosol | 48.48 | 48.38 |
| TraesCS6B01G148900.1 | Wheat | cytosol | 53.46 | 48.24 |
| HORVU4Hr1G072260.1 | Barley | cytosol | 52.38 | 48.21 |
| Os07t0112100-00 | Rice | cytosol | 53.03 | 48.04 |
| Zm00001d018648_P001 | Maize | cytosol | 51.73 | 47.99 |
| Os07t0111700-01 | Rice | cytosol, peroxisome | 48.48 | 47.97 |
| Os07t0111900-00 | Rice | extracellular | 48.48 | 47.06 |
| TraesCSU01G087500.1 | Wheat | cytosol | 53.9 | 46.72 |
| TraesCS5B01G531000.1 | Wheat | cytosol | 49.78 | 46.46 |
| Os06t0528700-01 | Rice | plasma membrane | 48.48 | 46.19 |
| TraesCS3D01G000800.1 | Wheat | cytosol | 51.3 | 45.93 |
| CDY15973 | Canola | plastid | 46.1 | 45.91 |
| TraesCS5A01G522900.1 | Wheat | cytosol | 49.35 | 45.88 |
| TraesCSU01G045200.2 | Wheat | cytosol | 51.3 | 45.75 |
| TraesCS3B01G014100.2 | Wheat | cytosol | 51.3 | 45.75 |
| CDY26543 | Canola | plastid | 45.89 | 45.69 |
| CDY68139 | Canola | mitochondrion | 44.37 | 45.66 |
| Os01t0368000-00 | Rice | cytosol | 45.24 | 45.63 |
| Os02t0580600-01 | Rice | cytosol | 46.32 | 45.63 |
| CDY15969 | Canola | plastid | 45.24 | 45.53 |
| CDY26541 | Canola | plastid | 45.02 | 45.32 |
| CDY31816 | Canola | plastid | 43.94 | 45.31 |
| TraesCSU01G033300.1 | Wheat | cytosol | 47.62 | 45.27 |
| CDY31813 | Canola | plastid | 45.02 | 45.12 |
| TraesCSU01G032200.1 | Wheat | peroxisome | 46.75 | 45.0 |
| CDY31244 | Canola | plastid | 43.29 | 44.64 |
| CDY72131 | Canola | cytosol | 28.36 | 44.56 |
| CDY12955 | Canola | extracellular, plastid | 44.59 | 44.49 |
| CDY21037 | Canola | plastid | 43.07 | 44.42 |
| CDX98082 | Canola | cytosol | 28.36 | 44.41 |
| TraesCS5A01G298300.1 | Wheat | cytosol | 47.19 | 44.4 |
| HORVU5Hr1G078450.1 | Barley | cytosol | 26.84 | 44.29 |
| Zm00001d018649_P001 | Maize | cytosol | 46.1 | 44.19 |
| CDY39802 | Canola | plastid | 12.12 | 44.09 |
| TraesCSU01G033200.1 | Wheat | cytosol | 25.32 | 43.98 |
| CDY68140 | Canola | plastid | 40.04 | 43.84 |
| HORVU4Hr1G089360.1 | Barley | cytosol | 48.27 | 43.73 |
| TraesCS5B01G297400.1 | Wheat | cytosol | 43.72 | 43.72 |
| CDY03270 | Canola | cytosol | 33.33 | 43.14 |
| CDY27695 | Canola | plastid | 22.29 | 42.74 |
| TraesCS5B01G530900.1 | Wheat | cytosol | 47.62 | 42.47 |
| CDY31817 | Canola | cytosol | 23.59 | 41.92 |
| CDY27691 | Canola | cytosol | 11.9 | 39.29 |
| CDX98777 | Canola | cytosol, peroxisome, plasma membrane | 22.94 | 37.99 |
| VIT_17s0000g06780.t01 | Wine grape | cytosol, peroxisome, plastid | 67.75 | 29.36 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | GO:A0A078ELZ9 | EnsemblPlants:CDY02157 | ProteinID:CDY02157 | ProteinID:CDY02157.1 |
| InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004499 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0050660 | GO:GO:0050661 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00113558001 | InterPro:IPR036188 | PFAM:PF00743 | PIRSF:PIRSF000332 | PRINTS:PR00370 |
| PANTHER:PTHR23023 | PANTHER:PTHR23023:SF86 | SUPFAM:SSF51905 | UniParc:UPI0004EEFF63 | SEG:seg | : |
Description
BnaA03g40100D
Coordinates
chrLK031932:-:427238..430120
Molecular Weight (calculated)
52643.8 Da
IEP (calculated)
5.646
GRAVY (calculated)
-0.332
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLETTKSEE PIMSQSKTVC VIGAGPSGLV SARELKKEGH KVVVMEQNDD VGGQWLYQPN VEEEDSLGKT KILKVHSSIY SSLRLISPRE IMGFSDFPFT
101: VKEGRDTRRF PGHEELWLYL KDFCEVFGLR EMIRFNVRVE FVGMVNDDDI TKRWRVKSVE KKSGEVIEEV FDAVVVATGH YSYPRLPSIK GMDLWKGKQV
201: HSHVYRVPDP FRDEVVVVVG GFISGPDISI ELVKVAKEVH LSVKSLDVSP GLSKAITKHQ SLHLQPQIES LEEDGRVIFV DGSCIVADTI LYCTGYRYKF
301: PFLESQGRVE VDDNRVGPLF EHTFSPSLSP SLSFVGIPQK LIGFPFFESQ AKWIAMILSG KTSLPSYDEM MQSVAEFYRA KEANGVPKRN THDIGRDFVN
401: YCDKYADYTG YPHLEEWRKK LCVTTILRSL DNLETYRDSW DDDHELLQEA LQDPYFAQRT TP
101: VKEGRDTRRF PGHEELWLYL KDFCEVFGLR EMIRFNVRVE FVGMVNDDDI TKRWRVKSVE KKSGEVIEEV FDAVVVATGH YSYPRLPSIK GMDLWKGKQV
201: HSHVYRVPDP FRDEVVVVVG GFISGPDISI ELVKVAKEVH LSVKSLDVSP GLSKAITKHQ SLHLQPQIES LEEDGRVIFV DGSCIVADTI LYCTGYRYKF
301: PFLESQGRVE VDDNRVGPLF EHTFSPSLSP SLSFVGIPQK LIGFPFFESQ AKWIAMILSG KTSLPSYDEM MQSVAEFYRA KEANGVPKRN THDIGRDFVN
401: YCDKYADYTG YPHLEEWRKK LCVTTILRSL DNLETYRDSW DDDHELLQEA LQDPYFAQRT TP
001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V
Arabidopsis Description
Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.