Factsheet for Zm00001d018648_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d020359_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	Zm00001d020359_P003	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018650_P001	Maize	cytosol	65.06	69.98
Zm00001d018652_P001	Maize	endoplasmic reticulum	66.67	69.6
Os07t0112000-00	Rice	cytosol	60.24	62.63
Zm00001d018649_P001	Maize	cytosol	60.04	62.03
Os07t0111700-01	Rice	cytosol, peroxisome	57.03	60.81
Os07t0111900-00	Rice	extracellular	57.43	60.08
Os01t0368000-00	Rice	cytosol	53.21	57.86
Os06t0528700-01	Rice	plasma membrane	55.82	57.32
Bra012970.1-P	Field mustard	cytosol	47.59	53.02
CDY23071	Canola	cytosol	48.59	52.38
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	47.79	52.31
Bra012971.1-P	Field mustard	cytosol	47.99	51.96
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	47.19	51.88
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	47.19	51.76
CDY02157	Canola	cytosol	47.99	51.73
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	46.99	51.66
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	47.19	51.65
CDY40773	Canola	mitochondrion	47.59	51.63
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	47.59	51.63
AT5G61290.1	Thale cress	cytosol	47.79	51.63
Bra028683.1-P	Field mustard	mitochondrion	47.19	51.2
CDY02158	Canola	cytosol	41.16	51.12
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	47.19	50.98
CDY23072	Canola	cytosol	40.76	50.62
AT5G07800.1	Thale cress	cytosol	46.59	50.43
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	11.45	50.0
Zm00001d029924_P001	Maize	mitochondrion	38.15	43.78
Zm00001d029865_P001	Maize	mitochondrion	37.95	42.95
Zm00001d027286_P001	Maize	cytosol	31.12	40.47
Zm00001d046637_P001	Maize	cytosol, mitochondrion, peroxisome, plastid	9.44	38.84
Zm00001d029922_P001	Maize	mitochondrion	34.14	35.49
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	48.59	22.7

Protein Annotations

EntrezGene:100274419	Gene3D:3.50.50.60	MapMan:35.1	UniProt:B4G0V6	EMBL:BT042994	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	ProteinID:ONM51027.1	PFAM:PF00743	PIRSF:PIRSF000332
PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86	SUPFAM:SSF51905	UniParc:UPI00017B7867	EnsemblPlantsGene:Zm00001d018648
EnsemblPlants:Zm00001d018648_P001	EnsemblPlants:Zm00001d018648_T001	SEG:seg	:	:	:

Description

FAD/NAD(P)-binding oxidoreductase family protein

Coordinates

chr7:+:1661087..1662933

Molecular Weight (calculated)

55541.8 Da

IEP (calculated)

5.732

GRAVY (calculated)

-0.306

Length

498 amino acids

Sequence
(BLAST)

001: MHVAVKMMAS STEEELEMNK KKVCVVGAGV SGLVSARELR REGHDVTVME QSGGVGGQWL YDPRTDASDP LGAAGVHSSV YASLRLTSPR DIMGFSDFPF
101: FPRSNDDGDS RRYPGHAEFL RYIRDYCDTF GLMDAVRLNT KVLHVGRPLL DDDGVVTRWT VRYCSSGHGV SEHEAVAEEE FDAVVVASGH YSQPRLPAIN
201: GMDKWTRRQL HSHSYRVPDS FHAEVVVLVG FHQSGVDIAL ELCKVARDVH VVSVKSLEGL TPGVRKAVPR HHNLHLHLQI ECLCEDGKVM FADGSCVVAD
301: SIIYCTGYDF SFPFLDTGGL VTVDDNRVGP LFEHTFPPAL APSLSFVGVP SQVQTPLFYE VQARWVAQAL SGRRLLPPAE EMLRAAEEYH RAREKAGVPR
401: RMSHAIFFDF DYCDEFGEKH VGLPRPPEWK KELMRAAVAR LLQDTETFRD DYRDGDLVLE SLRLEGWSSA PSPGTLNDKE NGIAMHDMMH DRDGETLE

Best Arabidopsis Sequence Match ( AT5G61290.1 )
(BLAST)

001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V

Arabidopsis Description

Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.