Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d020359_P003 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G61290.1 | Zm00001d020359_P003 | AT2G19560.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97845 | Sorghum | cytosol | 77.11 | 84.6 |
| EER95747 | Sorghum | cytosol | 74.73 | 73.15 |
| Zm00001d018649_P001 | Maize | cytosol | 73.43 | 70.54 |
| Zm00001d018652_P001 | Maize | endoplasmic reticulum | 71.27 | 69.18 |
| Zm00001d018648_P001 | Maize | cytosol | 69.98 | 65.06 |
| Os07t0112000-00 | Rice | cytosol | 63.93 | 61.8 |
| Os07t0111700-01 | Rice | cytosol, peroxisome | 61.56 | 61.03 |
| Os07t0111900-00 | Rice | extracellular | 62.42 | 60.71 |
| Os06t0528700-01 | Rice | plasma membrane | 62.2 | 59.38 |
| Os01t0368000-00 | Rice | cytosol | 58.32 | 58.95 |
| VIT_17s0000g06790.t01 | Wine grape | cytosol, peroxisome, plastid | 49.03 | 50.0 |
| PGSC0003DMT400063125 | Potato | cytosol, peroxisome, plastid | 48.81 | 49.67 |
| Bra012970.1-P | Field mustard | cytosol | 47.95 | 49.66 |
| AT5G61290.1 | Thale cress | cytosol | 49.03 | 49.24 |
| Solyc03g115560.2.1 | Tomato | cytosol, peroxisome, plastid | 48.38 | 49.23 |
| CDX99030 | Canola | cytosol, mitochondrion, peroxisome, plastid | 48.16 | 49.23 |
| CDY40773 | Canola | mitochondrion | 48.6 | 49.02 |
| CDX69991 | Canola | cytosol, mitochondrion, peroxisome, plastid | 47.95 | 49.01 |
| Bra012971.1-P | Field mustard | cytosol | 48.6 | 48.91 |
| CDY14028 | Canola | cytosol, mitochondrion, peroxisome, plastid | 48.38 | 48.8 |
| Bra028683.1-P | Field mustard | mitochondrion | 48.16 | 48.58 |
| CDY23071 | Canola | cytosol | 48.38 | 48.48 |
| CDY02157 | Canola | cytosol | 48.38 | 48.48 |
| Bra009308.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 48.16 | 48.37 |
| CDY02158 | Canola | cytosol | 41.68 | 48.13 |
| CDY23072 | Canola | cytosol | 41.47 | 47.88 |
| AT5G07800.1 | Thale cress | cytosol | 47.52 | 47.83 |
| KRH55196 | Soybean | cytosol, mitochondrion, peroxisome | 11.02 | 44.74 |
| Zm00001d029924_P001 | Maize | mitochondrion | 41.47 | 44.24 |
| Zm00001d029865_P001 | Maize | mitochondrion | 41.68 | 43.86 |
| Zm00001d046637_P001 | Maize | cytosol, mitochondrion, peroxisome, plastid | 10.58 | 40.5 |
| Zm00001d027286_P001 | Maize | cytosol | 33.05 | 39.95 |
| Zm00001d029922_P001 | Maize | mitochondrion | 36.72 | 35.49 |
| VIT_17s0000g06780.t01 | Wine grape | cytosol, peroxisome, plastid | 50.54 | 21.95 |
Protein Annotations
| Gene3D:3.50.50.60 | MapMan:35.1 | UniProt:A0A1D6HR91 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_mOase | InterPro:Flavin_mOase-like |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0004499 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0050660 | GO:GO:0050661 | GO:GO:0055114 |
| InterPro:IPR036188 | ProteinID:ONM51030.1 | PFAM:PF00743 | PIRSF:PIRSF000332 | PRINTS:PR00370 | PANTHER:PTHR23023 |
| PANTHER:PTHR23023:SF86 | SUPFAM:SSF51905 | UniParc:UPI000845733A | EnsemblPlantsGene:Zm00001d018650 | EnsemblPlants:Zm00001d018650_P001 | EnsemblPlants:Zm00001d018650_T001 |
| SEG:seg | : | : | : | : | : |
Description
FAD/NAD(P)-binding oxidoreductase family protein
Coordinates
chr7:-:1691114..1692849
Molecular Weight (calculated)
50972.6 Da
IEP (calculated)
5.921
GRAVY (calculated)
-0.395
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWSSKKVCV VGAGVSGLVS ARELRREGHD VTVMEQSGGV GGQWLYDPRT DASDPLGVAG AHSSVYASLR LNTPRESMGF SDYPFVYPAG NDDDGAGGDA
101: RRYPGHAEFL RYIRRFCDAF GLMDAVRLNT KVLHVAPSAP RGHGDGSVTR WTVRCSSRHG DCDGEAVTTE ETTFDAVVVA VGQFTQPRLP VINGMDKWSR
201: RQLHSHSYRV PDSFQDEAVV VVGCHASGVD IALELRAVAR DVHVSVKSVD DGVAIERLCE DGQVTFADGS RVVADSIVYC TGYGYSFPFL DTGGLVTVDD
301: GSRVGPLYEH TFPPALAPSL SFVGVPKRVV VPRFYETQAR WVAEVLSGRR ALPSSEEMMR AAEGYHHPAR EMMVAGVPKH LAHDIFDDYD YCDEFGEKHC
401: GFPRLERWKK ELRWSSIARQ RGEGEGEGED SESFRDVYRD SDLVREGLQA QGWPWPAGSH QHK
101: RRYPGHAEFL RYIRRFCDAF GLMDAVRLNT KVLHVAPSAP RGHGDGSVTR WTVRCSSRHG DCDGEAVTTE ETTFDAVVVA VGQFTQPRLP VINGMDKWSR
201: RQLHSHSYRV PDSFQDEAVV VVGCHASGVD IALELRAVAR DVHVSVKSVD DGVAIERLCE DGQVTFADGS RVVADSIVYC TGYGYSFPFL DTGGLVTVDD
301: GSRVGPLYEH TFPPALAPSL SFVGVPKRVV VPRFYETQAR WVAEVLSGRR ALPSSEEMMR AAEGYHHPAR EMMVAGVPKH LAHDIFDDYD YCDEFGEKHC
401: GFPRLERWKK ELRWSSIARQ RGEGEGEGED SESFRDVYRD SDLVREGLQA QGWPWPAGSH QHK
001: MVLVITEPIK SQSKTVCVIG AGPSGLVSAR ELKKEGHKVV VMEQNHDVGG QWLYQPNVDE EDTLGKTKTL KVHSSVYSSL RLASPREVMG FSDFPFIAKE
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V
101: GRDSRRFPGH EELLLYLKDF CQVFGLREMI RFNVRVEFVG MVNEDDDDDD DVKKWMVKSV KKSGEVMEEV FDAVVVASGH YSYPRLPTIK GMDLWKRKQL
201: HSHIYRVPEP FCDEVVVVVG CSMSGQDISI ELVEVAKEVH LSTKSLDIPP GLSKVIEKHQ NLHLHPQIES LEEDGRVIFE DGSCIVADTI LYCTGYEYKF
301: PFLESKGRVE IDDNRVGPLF EHTFSPSLSP FLSFVGIPRK LIGFPFFESQ AKWIAKLLSG KTSLPSSDQM MQSISDFYLA READGIPKRN THDIADFNYS
401: DKYADYIGFP HLEEWRKVLC LSAILNSIEN LETYRDSWDD DDLLQETLQD PYFTQLSIPS V
Arabidopsis Description
Flavin-containing monooxygenase FMO GS-OX-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.