Factsheet for Os06t0528700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os09t0386400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61290.1	Os09t0386400-01	AT2G19560.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0112000-00	Rice	cytosol	66.19	67.01
Os07t0111900-00	Rice	extracellular	64.74	65.97
Os07t0111700-01	Rice	cytosol, peroxisome	62.89	65.31
Zm00001d018650_P001	Maize	cytosol	59.38	62.2
EER97845	Sorghum	cytosol	54.02	62.09
Os01t0368000-00	Rice	cytosol	58.56	62.01
OQU88310	Sorghum	cytosol, mitochondrion	54.23	61.88
Zm00001d018652_P001	Maize	endoplasmic reticulum	59.79	60.8
EER95747	Sorghum	cytosol	59.18	60.68
Os07t0112100-00	Rice	cytosol	59.79	56.86
Zm00001d018648_P001	Maize	cytosol	57.32	55.82
Zm00001d018649_P001	Maize	cytosol	53.81	54.15
Os02t0580600-01	Rice	cytosol	50.31	52.03
Bra012970.1-P	Field mustard	cytosol	45.98	49.89
CDY23071	Canola	cytosol	46.6	48.92
VIT_17s0000g06790.t01	Wine grape	cytosol, peroxisome, plastid	45.77	48.9
CDY02157	Canola	cytosol	46.19	48.48
Solyc03g115560.2.1	Tomato	cytosol, peroxisome, plastid	45.36	48.35
PGSC0003DMT400063125	Potato	cytosol, peroxisome, plastid	45.36	48.35
CDX99030	Canola	cytosol, mitochondrion, peroxisome, plastid	45.15	48.34
CDX69991	Canola	cytosol, mitochondrion, peroxisome, plastid	44.95	48.12
Bra012971.1-P	Field mustard	cytosol	45.57	48.04
CDY40773	Canola	mitochondrion	45.36	47.93
CDY14028	Canola	cytosol, mitochondrion, peroxisome, plastid	45.36	47.93
AT5G61290.1	Thale cress	cytosol	45.36	47.72
Bra028683.1-P	Field mustard	mitochondrion	45.15	47.71
Bra009308.1-P	Field mustard	cytosol, mitochondrion, peroxisome	45.15	47.51
AT5G07800.1	Thale cress	cytosol	44.95	47.39
CDY02158	Canola	cytosol	38.56	46.63
CDY23072	Canola	cytosol	38.14	46.13
Os10t0553800-01	Rice	peroxisome	40.21	40.46
KRH55196	Soybean	cytosol, mitochondrion, peroxisome	9.48	40.35
Os10t0554300-00	Rice	cytosol, peroxisome, plastid	28.45	28.51
VIT_17s0000g06780.t01	Wine grape	cytosol, peroxisome, plastid	47.42	21.58

Protein Annotations

Gene3D:3.50.50.60	MapMan:35.1	EntrezGene:4341196	EMBL:AK105641	ProteinID:BAD54210.1	ProteinID:BAF19688.1
ProteinID:BAS98053.1	ProteinID:EAZ37211.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188
EnsemblPlantsGene:Os06g0528700	EnsemblPlants:Os06t0528700-01	PFAM:PF00743	PRINTS:PR00370	PANTHER:PTHR23023	PANTHER:PTHR23023:SF86
UniProt:Q5Z7A4	SUPFAM:SSF51905	UniParc:UPI0000446F8D	RefSeq:XP_015642183.1	SEG:seg	:

Description

Flavin-containing monooxygenase FMO family protein. (Os06t0528700-01)

Coordinates

chr6:-:19619923..19621610

Molecular Weight (calculated)

52958.7 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.179

Length

485 amino acids

Sequence
(BLAST)

001: MKKKVCVVGG GLVGLAAARE LQREGHDVSV LEQRGGVGGQ WLYDHTAAID GADPLGVAGV QSSVYASLRL ITPREVTGFS DFPFSPTTVA GGGDARRFPS
101: HAEFLRYLRD FCDAFGLMDV VRLNTRVLRV AADRDGWAVR SRRGEVETEE VFDAVVVAVG SYTQPRLPSI DGMEAWPGRQ LHSHSYRVPD SFRGEVVVVV
201: GCGFSGKDIA LELRRVAREV HLSVRSTEEA MASPAMSKML ARYGNLHLRP QIARLCEEED GAVVAFADGS RVAADTVVYC TGYSYSYPFL DTGGKVTVDD
301: DNRVGPLFEH VFPPELAPSL SFLGIPNMVT TRFFEAQARW VAQVLSGRRA LPPAGDMLRA AEEHARAMDA AGVARRRAHD VPDLGEEFCE RSCGFPRLEE
401: WEKELIWTSI TAMRDDLESF RDDFRVTDLV ADGLRRHGWI LAPAPEPEPL RQEDVVAGDG EGEGVQPVQA NQAAVASPLG FINSA

Best Arabidopsis Sequence Match ( AT1G12200.1 )
(BLAST)

001: MATSHPDPTT SRHVAVIGAG AAGLVAAREL RREGHSVVVL ERGSQIGGVW AYTSQVEPDP LSLDPTRPVV HSSLYRSLRT NIPRECMGFT DFPFATRPHD
101: GSRDPRRHPA HTEVLAYLRD FAKEFDIEEM VRFETEVVKA EQVAAEGEER GKWRVESRSS DGVVDEIYDA VVVCNGHYTE PRHALITGID SWPGKQIHSH
201: NYRVPDQFKD QVVIVIGSSA SGVDICRDIA QVAKEVHVSS RSTSPDTYEK LTGYENLWLH STIQIAREDG SVVFENGKTI YADTIMHCTG YKYYFPFLDT
301: KGEVTVDDNR VGPLYKHVFP PALAPSLSFI GLPWQITPFP MFELQSKWVA AVLSGRVSLP SQDEMMEDTK AFYDKLEASG IPKRYTHLMP DDSQFEYDNW
401: LADQCEYPRI EKWREQMFYI GFKRIYAQSS TYRDNWDDDH LIVEAYDDFV KFMSSYQELL PMLKT

Arabidopsis Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178W1K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.