Factsheet for Os09t0386400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0368000-00
Os01t0836400-02
Os02t0180100-01
Os02t0580600-01
Os05t0462600-01
Os06t0528700-01
Os07t0111700-01
Os07t0111900-00
Os07t0112000-00
Os07t0112100-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19560.1	Os01t0836400-02	AT2G39340.1	19843313
AT2G19560.1	Os05t0462600-01	AT2G39340.1	19843313
AT2G19560.1	Os02t0180100-01	AT5G16310.1	19843313
AT2G19560.1	Os01t0368000-00	AT5G61290.1	19843313
AT2G19560.1	Os02t0580600-01	AT5G61290.1	19843313
AT2G19560.1	Os06t0528700-01	AT5G61290.1	19843313
AT2G19560.1	Os07t0111700-01	AT5G61290.1	19843313
AT2G19560.1	Os07t0111900-00	AT5G61290.1	19843313
AT2G19560.1	Os07t0112000-00	AT5G61290.1	19843313
AT2G19560.1	Os07t0112100-00	AT5G61290.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98853	Sorghum	cytosol	91.2	91.2
TraesCS5D01G207800.1	Wheat	cytosol	89.73	89.73
TraesCS5B01G200200.1	Wheat	cytosol	89.49	89.49
TraesCS5A01G201500.1	Wheat	cytosol	89.49	89.49
HORVU5Hr1G059930.4	Barley	cytosol	88.75	88.75
Zm00001d020359_P003	Maize	cytosol	91.44	87.38
GSMUA_Achr7P18480_001	Banana	cytosol	75.06	74.33
VIT_11s0016g02290.t01	Wine grape	cytosol	71.15	70.46
KRH19149	Soybean	cytosol, nucleus	69.68	69.51
KRH02720	Soybean	cytosol, nucleus	69.44	68.77
CDY66989	Canola	cytosol	59.9	68.06
CDY67021	Canola	cytosol	59.66	67.97
PGSC0003DMT400034206	Potato	cytosol	68.95	67.95
Solyc07g039210.2.1	Tomato	nucleus	68.7	67.71
PGSC0003DMT400056705	Potato	cytosol	29.34	67.42
CDY35873	Canola	cytosol	66.75	66.1
Bra040682.1-P	Field mustard	cytosol	66.5	65.86
AT2G19560.1	Thale cress	cytosol	64.3	63.68
CDY13554	Canola	cytosol	26.16	61.85
CDY13555	Canola	cytosol, nucleus, vacuole	16.14	34.38

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.25.40.570	MapMan:16.11.2.2	EntrezGene:4346949	EMBL:AK063271	ProteinID:BAD26107.1
ProteinID:BAF24988.1	ProteinID:BAT07885.1	GO:GO:0000502	GO:GO:0000973	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005643	GO:GO:0006139	GO:GO:0006368
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009719	GO:GO:0009723	GO:GO:0009873	GO:GO:0009987
GO:GO:0016043	GO:GO:0016973	GO:GO:0035327	GO:GO:0048364	GO:GO:0060968	GO:GO:0070390
GO:GO:0071033	InterPro:IPR000717	InterPro:IPR036388	EnsemblPlantsGene:Os09g0386400	EnsemblPlants:Os09t0386400-01	InterPro:PCI_dom
PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR12732	PANTHER:PTHR12732:SF0	UniProt:Q6H592	UniParc:UPI00003B4619
InterPro:WH-like_DNA-bd_sf	RefSeq:XP_015610624.1	SEG:seg	:	:	:

Description

Proteasome component region PCI domain containing protein. (Os09t0386400-01)

Coordinates

chr9:-:13174453..13178163

Molecular Weight (calculated)

46532.9 Da

IEP (calculated)

9.646

GRAVY (calculated)

-0.046

Length

409 amino acids

Sequence
(BLAST)

001: MAAYLSMGEA HRRIADYLSR VADSVSSSDG AALASLLAVS SAQAPAPLSD ALSAFPDFPR LAADRYPHLS DLLPPLLRAI HSHSLRRFAD AYSSFEKAAN
101: AFLQEFRNWE TPWAMEAMHT VALEIRLLAE KADRELATSG KNPDKLQSAG SFLMKVFGAL AVKGPKRIGA LYVTCQLFKI YFRLGTVHLC RSVIRSIETA
201: RNFDFEDFPV KDKVTYMYYT GRLEVFNENF LVADQKLTYA LVHCNPQYES NLRRILKFLI PVKLSIGVLP RITLLERYNL LEYADVVTSL KRGDLRLLRQ
301: ALERHEDQFL KSGVYLVLEK LELQVYQRLV KKIHIIQRQK EPAKAHQIKL EVVVKALKWL EIDMDVDEVE CIMACLIYKN LIKGYFAHKS KVLVLSKQDP
401: FPKLNGKPV

Best Arabidopsis Sequence Match ( AT2G19560.1 )
(BLAST)

001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS

Arabidopsis Description

EER5Enhanced ethylene response protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.