Factsheet for GSMUA_Achr7P18480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P00030_001
GSMUA_Achr5P27420_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19560.1	GSMUA_AchrUn_...	AT2G39340.1	19843313
AT2G19560.1	GSMUA_Achr5P27420_001	AT3G06290.1	19843313
AT2G19560.1	GSMUA_Achr3P00030_001	AT5G16310.1	19843313
AT2G19560.1	GSMUA_AchrUn_...	AT5G16310.1	19843313

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g02290.t01	Wine grape	cytosol	78.93	78.93
Os09t0386400-01	Rice	cytosol	74.33	75.06
KRH19149	Soybean	cytosol, nucleus	73.85	74.39
KRH02720	Soybean	cytosol, nucleus	74.33	74.33
PGSC0003DMT400034206	Potato	cytosol	74.09	73.73
Solyc07g039210.2.1	Tomato	nucleus	73.85	73.49
Bra040682.1-P	Field mustard	cytosol	72.88	72.88
CDY35873	Canola	cytosol	72.88	72.88
EER98853	Sorghum	cytosol	72.16	72.86
CDY67021	Canola	cytosol	63.2	72.7
CDY66989	Canola	cytosol	62.95	72.22
PGSC0003DMT400056705	Potato	cytosol	30.99	71.91
TraesCS5D01G207800.1	Wheat	cytosol	70.94	71.64
AT2G19560.1	Thale cress	cytosol	71.43	71.43
TraesCS5A01G201500.1	Wheat	cytosol	70.7	71.39
TraesCS5B01G200200.1	Wheat	cytosol	70.7	71.39
HORVU5Hr1G059930.4	Barley	cytosol	70.46	71.15
Zm00001d020359_P003	Maize	cytosol	72.16	69.63
CDY13554	Canola	cytosol	28.57	68.21
CDY13555	Canola	cytosol, nucleus, vacuole	17.43	37.5

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.25.40.570	MapMan:16.11.2.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009723	GO:GO:0009873	GO:GO:0009987	GO:GO:0016973
GO:GO:0048364	GO:GO:0060968	EnsemblPlantsGene:GSMUA_Achr7G18480_001	EnsemblPlants:GSMUA_Achr7P18480_001	EnsemblPlants:GSMUA_Achr7T18480_001	InterPro:IPR000717
InterPro:IPR036388	UniProt:M0TIN5	InterPro:PCI_dom	PFAM:PF01399	PFscan:PS50250	PANTHER:PTHR12732
PANTHER:PTHR12732:SF0	UniParc:UPI00029578CB	InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:

Description

Putative PCI domain-containing protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G18480_001]

Coordinates

chr7:-:21241264..21247885

Molecular Weight (calculated)

47050.8 Da

IEP (calculated)

9.765

GRAVY (calculated)

-0.033

Length

413 amino acids

Sequence
(BLAST)

001: MAYLSMGEAH RRITDYLSRF SDAVSSQDAA VLSPLLAVSS NSASLQSLAD ALNVFQDSNR LVGQLERSSQ LAEIVSPLLR CIQSYRLGRF ADAYVVLEKA
101: ANAFLQEFRN WETPWAMEAL YTLALEIRLL AEKADRELAS SGKNPEKLQG AGSFLMRVFG ALAGKGPKRA GALYVACQLF KVYFKLGTVH LCRSVIRSIE
201: TARIFDFEEF PVKDKVTYMY YTGRLEVYNE NFLVADQKLT YALMHCSPRK EANKRMILKY LIPVKLSIGI LPKQWLIEKY NLIEYGEVVN AIKKGDLRLL
301: RQALREHEDR FLRSGVYLVL EKLELLVYQR LIKKIYVLQK QKDPSKAHQV KLEIIVKALK WLELDMDIDE VECIVAILIY KNLIKGYIAH KSKVVVLSKQ
401: DPFPKLNGKP IGS

Best Arabidopsis Sequence Match ( AT2G19560.1 )
(BLAST)

001: MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF
101: ANAFVQEFRN WESAWALEAL YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF KTYFKLGTVN LCRSVIRSIE
201: TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL
301: RHALQEHEDR FLRSGVYLVL EKLELQVYQR LMKKIYINQK LSDPARAHQL KLEGIAKALR WLDMDMDLDE VECIMTILIY KNLVKGYLAH KSKVVVLSKQ
401: DPFPKLNGKP VSS

Arabidopsis Description

EER5Enhanced ethylene response protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWE6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.