Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr5P27420_001 | |
| GSMUA_Achr6P10140_001 | |
| GSMUA_Achr7P18480_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G39340.1 | GSMUA_Achr7P18480_001 | AT2G19560.1 | 19843313 |
| AT2G39340.1 | GSMUA_Achr5P27420_001 | AT3G06290.1 | 19843313 |
| AT2G39340.1 | GSMUA_Achr6P10140_001 | AT3G50360.1 | 19843313 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g03720.t01 | Wine grape | plastid | 33.26 | 63.69 |
| OQU87820 | Sorghum | nucleus | 46.94 | 48.35 |
| Os05t0462600-01 | Rice | mitochondrion | 41.55 | 48.02 |
| TraesCS1D01G286500.8 | Wheat | nucleus | 47.15 | 47.15 |
| HORVU1Hr1G071780.21 | Barley | nucleus | 46.94 | 46.94 |
| TraesCS1B01G297000.5 | Wheat | nucleus | 46.94 | 46.75 |
| TraesCS1A01G287600.8 | Wheat | nucleus | 46.94 | 46.75 |
| OQU78144 | Sorghum | nucleus | 47.98 | 46.3 |
| Os01t0836400-02 | Rice | nucleus | 43.83 | 46.28 |
| TraesCS3A01G354400.3 | Wheat | nucleus | 50.47 | 45.09 |
| KRG92986 | Soybean | nucleus | 46.94 | 45.03 |
| KRH36229 | Soybean | nucleus | 46.74 | 44.65 |
| Zm00001d010546_P003 | Maize | nucleus | 47.25 | 44.1 |
| AT2G39340.1 | Thale cress | nucleus | 45.91 | 44.04 |
| TraesCS3D01G348300.1 | Wheat | cytosol | 50.26 | 43.81 |
| TraesCS3B01G387400.1 | Wheat | nucleus | 50.47 | 43.44 |
| Solyc05g054910.2.1 | Tomato | nucleus | 42.9 | 43.08 |
| Bra005050.1-P | Field mustard | nucleus | 44.25 | 43.0 |
| Bra005052.1-P | Field mustard | nucleus | 44.25 | 43.0 |
| CDX74854 | Canola | nucleus | 44.15 | 42.9 |
| CDX93271 | Canola | nucleus | 43.63 | 42.7 |
| CDY44640 | Canola | nucleus | 44.46 | 42.6 |
| CDY07001 | Canola | nucleus | 43.32 | 42.57 |
| Bra017081.1-P | Field mustard | nucleus | 43.21 | 42.42 |
| Zm00001d038393_P012 | Maize | nucleus | 44.04 | 41.38 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 49.95 | 40.99 |
| Zm00001d003061_P001 | Maize | nucleus | 5.08 | 39.84 |
| HORVU1Hr1G029080.1 | Barley | extracellular | 6.74 | 38.24 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 14.51 | 35.18 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP01630_001 | EnsemblPlants:GSMUA_AchrUn_randomT01630_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG01630_001 | Gene3D:1.25.40.990 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 | PANTHER:PTHR12436 |
| PANTHER:PTHR12436:SF28 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg | UniParc:UPI000294DA44 | UniProt:M0U5H5 |
| MapMan:16.11.2.1 | : | : | : | : | : |
Description
SAC3/GANP family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01630_001]
Coordinates
chrchrUn_random:+:6390709..6406302
Molecular Weight (calculated)
106612.0 Da
IEP (calculated)
6.552
GRAVY (calculated)
-0.642
Length
965 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVSGDTQEG INTASHASTS TNLGAENAAQ AYSGYVPYSS STVPYNYTSV GYQNSFYGYH LQGNDSSTQQ IGGDQNSGAA YQPLSTFQNS GSYVAPTSYL
101: GTYYNAGDNQ TGTGYETNSY NYQTSLWNDG NYHSYPYHHY SSYTTSSTSS AQSSATISGN SLYYQQQYNN WPYYQSQPAP IVNGAAGLEN TSATSLQSAG
201: YSAEGASSGY PYISNQPPPP GTTSWREDSR PSGMPSFQQH LILGIMHLVY RCHELGSYIL QSQKLFGEAV TPYHLNKNWE AVAPGMQTHH INQSSYFQQP
301: LNSTPLPNEK HANEQKVLYS LAPNLQHAAS NQVPENFQPP LQTVPLTETR QVSKMQIPTN PRIAPNVGVS MLKTQKESCI VSAATKPAYI SVSVPKPSNQ
401: SSSEDDAGAI TKGTFSPSFC AYVERSFARC KDDAQRSANQ SILKQMITMA TADGTLFTKN WDTEPLFSLP VDQSSQQSLV SDSSLPTHKR SPTRRKSRWE
501: PIADEKLGEK LTSVDSHSAI DARWGQVEAA EKKVDSKISE SKSVNGWGGF KYASFQQQSA LQKFGQRPNK KQRFSDTSSV TENGDPSSDS DKEQNLTKYY
601: ASAIALANSP EEKRKRENRF KRFEKGQGNQ AELTNFRPKT AGGGSMYTRR AGALLKAKSY EDGCNKAVED IDWDSLTVKG TCQEIEKRYL RLTSAPDPST
701: VRPEEVLEKA LQMVQSSQKN YLYKCDQLKS IRQDLTVQRI QNALTVKVYE THARLALEAG DLPEFNQCQS QLQRLYAEGI QGCYMEFAAY NLLSIILHSN
801: NKSDLLSSMT RLSAKAKDDE AVKHSLAVHS AVSSGNFILF FRLYKTAPNL NTFLMDLYVE KMRFEAVQCM SKSYRPVIPV AYITCALGFS KAIQMDDSQD
901: TSIEGVEECE EWLRAHGAVL TVDNNGELQL DAKASSTTLY MPEQEDAVAH GDASLAVDDF LTRTS
101: GTYYNAGDNQ TGTGYETNSY NYQTSLWNDG NYHSYPYHHY SSYTTSSTSS AQSSATISGN SLYYQQQYNN WPYYQSQPAP IVNGAAGLEN TSATSLQSAG
201: YSAEGASSGY PYISNQPPPP GTTSWREDSR PSGMPSFQQH LILGIMHLVY RCHELGSYIL QSQKLFGEAV TPYHLNKNWE AVAPGMQTHH INQSSYFQQP
301: LNSTPLPNEK HANEQKVLYS LAPNLQHAAS NQVPENFQPP LQTVPLTETR QVSKMQIPTN PRIAPNVGVS MLKTQKESCI VSAATKPAYI SVSVPKPSNQ
401: SSSEDDAGAI TKGTFSPSFC AYVERSFARC KDDAQRSANQ SILKQMITMA TADGTLFTKN WDTEPLFSLP VDQSSQQSLV SDSSLPTHKR SPTRRKSRWE
501: PIADEKLGEK LTSVDSHSAI DARWGQVEAA EKKVDSKISE SKSVNGWGGF KYASFQQQSA LQKFGQRPNK KQRFSDTSSV TENGDPSSDS DKEQNLTKYY
601: ASAIALANSP EEKRKRENRF KRFEKGQGNQ AELTNFRPKT AGGGSMYTRR AGALLKAKSY EDGCNKAVED IDWDSLTVKG TCQEIEKRYL RLTSAPDPST
701: VRPEEVLEKA LQMVQSSQKN YLYKCDQLKS IRQDLTVQRI QNALTVKVYE THARLALEAG DLPEFNQCQS QLQRLYAEGI QGCYMEFAAY NLLSIILHSN
801: NKSDLLSSMT RLSAKAKDDE AVKHSLAVHS AVSSGNFILF FRLYKTAPNL NTFLMDLYVE KMRFEAVQCM SKSYRPVIPV AYITCALGFS KAIQMDDSQD
901: TSIEGVEECE EWLRAHGAVL TVDNNGELQL DAKASSTTLY MPEQEDAVAH GDASLAVDDF LTRTS
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.