Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G387400.1 | Wheat | nucleus | 94.76 | 93.58 |
| TraesCS3A01G354400.3 | Wheat | nucleus | 90.06 | 92.31 |
| HORVU3Hr1G087140.16 | Barley | nucleus, plastid | 86.18 | 81.12 |
| Os01t0836400-02 | Rice | nucleus | 61.07 | 73.96 |
| OQU87820 | Sorghum | nucleus | 55.65 | 65.74 |
| TraesCS1D01G286500.8 | Wheat | nucleus | 53.48 | 61.35 |
| VIT_13s0067g03720.t01 | Wine grape | plastid | 26.02 | 57.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.81 | 50.26 |
| KRG92986 | Soybean | nucleus | 38.57 | 42.45 |
| KRH36229 | Soybean | nucleus | 38.57 | 42.28 |
| Solyc05g054910.2.1 | Tomato | nucleus | 36.04 | 41.52 |
| CDX74854 | Canola | nucleus | 36.22 | 40.38 |
| Bra017081.1-P | Field mustard | nucleus | 35.77 | 40.28 |
| Bra005052.1-P | Field mustard | nucleus | 36.13 | 40.28 |
| Bra005050.1-P | Field mustard | nucleus | 36.13 | 40.28 |
| CDX93271 | Canola | nucleus | 35.86 | 40.26 |
| CDY07001 | Canola | nucleus | 35.59 | 40.12 |
| CDY44640 | Canola | nucleus | 36.4 | 40.02 |
| AT2G39340.1 | Thale cress | nucleus | 36.22 | 39.86 |
| VIT_13s0067g03680.t01 | Wine grape | nucleus | 10.39 | 28.89 |
| TraesCS6D01G344300.1 | Wheat | nucleus | 16.89 | 26.19 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G348300.1 | EnsemblPlantsGene:TraesCS3D01G348300 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF28 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg | MapMan:16.11.2.1 |
Description
No Description!
Coordinates
chr3D:+:459880507..459895692
Molecular Weight (calculated)
119693.0 Da
IEP (calculated)
7.365
GRAVY (calculated)
-0.730
Length
1107 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAQGGEVAA GSDPKPNEGW SEEQPSSSQY QPSASGHHAW SSSGASWNYP VDNSNQNAVY YDPQRDVSVS GATQNVTSGA PHVTQPAVGT ANATNTYAPY
0101: SNSVQPGYNA AHYPNYYYNY PQPATDSSVH QGVDQSSGAA YQPLTSFPNS GSYVGPTSNT YYNAGADQTA QAYATNNYYY QNNAWSGGSS GDVHAQTYQT
0201: YTPSDTNAAQ SSCSLPTTSF HCPQQYNQWS NYYDQPAPNS GGFAVAGSSA SDTKSASVGS GYAYPSTQPP PPGTTQRKND AVAPTAPPQA AGITGFRSQH
0301: VNQAPGAPGF QSQHVNQAPG APGFQSQHVN QAPGTPGFQG QHANQAPGXX GFQSQHVNQA PGAPGFQSQH VNPAPGAPGF QSQHVNPSPD TPGFQSQHVN
0401: LAPVTPGFQS HHVNPSPDTP GFQNPYANKT AAVSGFQNHY ANQAPAYQQN STSHGQLPLS NQRDEQKALH AQGQSSNVYS VNHVNENSQP TLQGFTRTVA
0501: SVNKVHIPTN PRIAPGFPMS MPQTGKKLEV DSSLKPAYVG VNMPKNDVNA AQDGHGAAIQ GSFPVSLCTY VERNLSRCKD DAQRSATQSI MKEIITKATA
0601: DGTLHTKNWD IEPLLALPEN AKGTFMTSNA KDSSPFSFST SRRSPSRRTK SRWEPVAEEK VTNNMEVVSK EPAKSNACTT WENTRRTGNT WNLGNFVQSR
0701: QAPPSQWNQR PSKKQRIGGN TNLTKNGNAS SDSDKEQDLT KYYASSIALT NSPEEKKRRE HRSKRFERSQ GASSKSMSSI PHKNGAANVY TRGAISMLNN
0801: RSNGDGASLA VEDIDWDALT IKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALHMVETS EKNYLYKCDQ LKSIRQDLTV QRIQNELTVK VYETHARFAL
0901: QAGDLSEYNQ CQSQLTRLYG EGIAGCHLEF SAYNLLCVML HSNNKRDLLS SMASLSKEAR LDETVKHALA VHSAVSSGNY VMFFKLYKKA PGLNSCLMDL
1001: YVERMRFEAI KCMSKSYRPT VPVRYVTRVL GFTRVDVLCE ANVADGLEEC EEWLKAHGAV LTVDENSGEL QIDTKVSSAS LYMPEPDNAV SHGDASLAVD
1101: DFLARAS
0101: SNSVQPGYNA AHYPNYYYNY PQPATDSSVH QGVDQSSGAA YQPLTSFPNS GSYVGPTSNT YYNAGADQTA QAYATNNYYY QNNAWSGGSS GDVHAQTYQT
0201: YTPSDTNAAQ SSCSLPTTSF HCPQQYNQWS NYYDQPAPNS GGFAVAGSSA SDTKSASVGS GYAYPSTQPP PPGTTQRKND AVAPTAPPQA AGITGFRSQH
0301: VNQAPGAPGF QSQHVNQAPG APGFQSQHVN QAPGTPGFQG QHANQAPGXX GFQSQHVNQA PGAPGFQSQH VNPAPGAPGF QSQHVNPSPD TPGFQSQHVN
0401: LAPVTPGFQS HHVNPSPDTP GFQNPYANKT AAVSGFQNHY ANQAPAYQQN STSHGQLPLS NQRDEQKALH AQGQSSNVYS VNHVNENSQP TLQGFTRTVA
0501: SVNKVHIPTN PRIAPGFPMS MPQTGKKLEV DSSLKPAYVG VNMPKNDVNA AQDGHGAAIQ GSFPVSLCTY VERNLSRCKD DAQRSATQSI MKEIITKATA
0601: DGTLHTKNWD IEPLLALPEN AKGTFMTSNA KDSSPFSFST SRRSPSRRTK SRWEPVAEEK VTNNMEVVSK EPAKSNACTT WENTRRTGNT WNLGNFVQSR
0701: QAPPSQWNQR PSKKQRIGGN TNLTKNGNAS SDSDKEQDLT KYYASSIALT NSPEEKKRRE HRSKRFERSQ GASSKSMSSI PHKNGAANVY TRGAISMLNN
0801: RSNGDGASLA VEDIDWDALT IKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALHMVETS EKNYLYKCDQ LKSIRQDLTV QRIQNELTVK VYETHARFAL
0901: QAGDLSEYNQ CQSQLTRLYG EGIAGCHLEF SAYNLLCVML HSNNKRDLLS SMASLSKEAR LDETVKHALA VHSAVSSGNY VMFFKLYKKA PGLNSCLMDL
1001: YVERMRFEAI KCMSKSYRPT VPVRYVTRVL GFTRVDVLCE ANVADGLEEC EEWLKAHGAV LTVDENSGEL QIDTKVSSAS LYMPEPDNAV SHGDASLAVD
1101: DFLARAS
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.