Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G286500.8 | Wheat | nucleus | 25.63 | 18.96 |
| TraesCS3D01G348300.1 | Wheat | cytosol | 26.19 | 16.89 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G344300.1 | EnsemblPlantsGene:TraesCS6D01G344300 | Gene3D:1.25.40.990 | InterPro:SAC3/GANP/THP3 | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF4 |
| PFAM:PF03399 | SEG:seg | MapMan:16.11.2.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:443956078..443960536
Molecular Weight (calculated)
79668.6 Da
IEP (calculated)
10.148
GRAVY (calculated)
-0.864
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPRRRLGRS PPRKRERQAS PANDYRNRHL WRSPPRDFAP SWTGAPSPPA AFLERPPSPP LPLWRYIDYS REEPYGPRPR FEPWRVSSPS GPQREADSFG
101: NGFLDHDWPE YSRESNYGTP TSTRFLEFAD SFPGQSRFER GRGDDFRRPN RSLPRSPMDW DSPFFADEHQ CSSSRPRDWT PALDDRRRRG SSPPGRHEGR
201: GHVQSRDETF YRSGPFPVER GRGDGFEATP RPRFSHGAMF PERSPAIILE GERRWTPSPQ DRRRGALFPG SDGHDRWTQR SMERLGQQSS PRGDRGGSFL
301: ETGDRGERYP LGPPPPHNLG GGSGGGFPPR RFFRGRGGLQ QTGPPGGSGR QRSPRQSSVL PALRTEPEAS GGSRRKGKAF PRKRSPRPVR GVLSEKQVAG
401: AIKSTGVEEP QGPSESKHDD SNGAVRPEAA DNEGAIKPEA TVDEGDGTGL IVGMCTDVQK GYFRLTGPPD ATKIRPKPVL VEALKFVQVS SKDYNFKTDQ
501: LKSIRQDMTI QNIEDELSVQ VYEYHARLAL CNRDMAELNL CLTKLHCLYG NKRNGGHHGE FAAYVILLSA IQDKNTELMS KLGRLSSDLK QQEAVKHAKE
601: VAHSIQTGNY ASFFKLYKVA PNLNGYLMCL CFEKMRFEGL KCMAKAYATK IPVKYVSKIL GFAAVDGSVD WLKSHGAVLS SFENGEMALL PKDSTALVST
701: PVVAADGIRA FQAH
101: NGFLDHDWPE YSRESNYGTP TSTRFLEFAD SFPGQSRFER GRGDDFRRPN RSLPRSPMDW DSPFFADEHQ CSSSRPRDWT PALDDRRRRG SSPPGRHEGR
201: GHVQSRDETF YRSGPFPVER GRGDGFEATP RPRFSHGAMF PERSPAIILE GERRWTPSPQ DRRRGALFPG SDGHDRWTQR SMERLGQQSS PRGDRGGSFL
301: ETGDRGERYP LGPPPPHNLG GGSGGGFPPR RFFRGRGGLQ QTGPPGGSGR QRSPRQSSVL PALRTEPEAS GGSRRKGKAF PRKRSPRPVR GVLSEKQVAG
401: AIKSTGVEEP QGPSESKHDD SNGAVRPEAA DNEGAIKPEA TVDEGDGTGL IVGMCTDVQK GYFRLTGPPD ATKIRPKPVL VEALKFVQVS SKDYNFKTDQ
501: LKSIRQDMTI QNIEDELSVQ VYEYHARLAL CNRDMAELNL CLTKLHCLYG NKRNGGHHGE FAAYVILLSA IQDKNTELMS KLGRLSSDLK QQEAVKHAKE
601: VAHSIQTGNY ASFFKLYKVA PNLNGYLMCL CFEKMRFEGL KCMAKAYATK IPVKYVSKIL GFAAVDGSVD WLKSHGAVLS SFENGEMALL PKDSTALVST
701: PVVAADGIRA FQAH
0001: MNHGGNTQAV APMDPNSIEN RYGVDGSQTQ KYSYQYSTGS ESAPWTGHSV ENQAVENGNY SNSNYYHPQP TGPATGNVQE IPNTVSFTIS STSGTANVAQ
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
0101: DYSGYTPYQT SSDPHNYSNT GYSNYYSGYQ QQPSQSYPQP VGAYQNTGAP QPLSSFQNPG SYAGTPSYSG TYYNPADYQT AGGYQSTNYN NQTAGSYPST
0201: NYSNQTPASN QGNYTDYTSN PYQNYTPDAA NTHSSTIATT PPVHYQQNYQ QWTEYYSQTE VPCAPGTEKL STPTTSAYSQ SFPVPGVTSE MPASNSQPAP
0301: SYVQPWRPET DSSHPPSQQP GAAVSTSNDT YWMHQAPSLQ AHHPVPPQNN YQSPLETKPL YETPFQGHQR ATYPQEMNSQ SSFHQAPLGY RQPTQTAPLV
0401: DSQRVSKVQI PTNPRIASNL PSGFTKMDKD STAASAAQAP AYVSVSMPKP KDHTTAMSDP GTFPKSLRGF VERAFARCKD DKEKESCEVA LRKIVKKAKE
0501: DNTLYTRDWD TEPLSTVTTT NVTNSESSSA QLSSLQNKSP TRRPKSRWEP LVEGKPFVKP ASTFSSAVKF GVWNHQNENN KKSSESFQKV DAATGFKPTY
0601: SGQNSAKKSF QRPVKRQRFS GGAATAIDDE ASSDSDKDLT PYYSSAMALA GSAEEKKRRD SRSKRFEKIQ GHSRGNDLTK PKNANVGNLH SRRATALRLS
0701: KVFDESGSRA VEDIDWDALT VKGTCQEIEK RYLRLTSAPD PATVRPEDVL EKALIMVQDS QKNYLFKCDQ LKSIRQDLTV QRIHNHLTAK VYETHARLAL
0801: EAGDLPEYNQ CLSQLKTLYA EGVEGCSLEF AAYSLLYITL HSNNNRELLS SMSRLSEEDK KDEAVRHALS VRAAVTSGNY VMFFRLYKTA PNMNSCLMDL
0901: YVEKMRYKAV NFMSRSCRPT IPVSYIVQVL GFTGAASEGT DEKETDGMED CLEWLKTHGA NIITDSNGDM LLDTKATSTS LFMPEPEDAV AHGDRNLDVN
1001: DFFTRT
Arabidopsis Description
SAC3ASAC3 family protein A [Source:UniProtKB/Swiss-Prot;Acc:F4IUY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.