Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G144800.1 | Wheat | plastid | 90.06 | 97.64 |
| TraesCS2A01G141300.1 | Wheat | cytosol | 96.26 | 97.34 |
| HORVU2Hr1G025040.2 | Barley | plastid | 55.7 | 93.26 |
| OQU90370 | Sorghum | plastid | 58.94 | 59.64 |
| Zm00001d022344_P001 | Maize | cytosol | 39.05 | 57.48 |
| Zm00001d022343_P001 | Maize | plastid | 57.21 | 56.48 |
| GSMUA_Achr5P27420_001 | Banana | cytosol | 29.61 | 42.47 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 31.4 | 37.1 |
| KRH20952 | Soybean | nucleus | 30.0 | 35.59 |
| KRH11322 | Soybean | nucleus | 30.45 | 35.03 |
| Solyc12g035670.1.1 | Tomato | nucleus | 29.55 | 33.8 |
| CDY08059 | Canola | cytosol, plastid | 18.04 | 33.54 |
| Zm00001d022346_P001 | Maize | cytosol | 49.05 | 32.03 |
| CDY05249 | Canola | nucleus | 20.39 | 31.44 |
| Bra001190.1-P | Field mustard | plastid | 28.38 | 30.98 |
| Bra020761.1-P | Field mustard | cytosol | 28.49 | 30.97 |
| CDX74111 | Canola | plastid | 28.1 | 30.52 |
| AT3G06290.1 | Thale cress | plastid | 28.6 | 30.17 |
| CDY24705 | Canola | cytosol, plastid | 20.45 | 30.12 |
| TraesCS1B01G271000.1 | Wheat | cytosol | 6.09 | 27.95 |
| CDY70818 | Canola | mitochondrion | 4.97 | 23.36 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G166300.1 | EnsemblPlantsGene:TraesCS2B01G166300 | Gene3D:1.25.40.990 | InterPro:IPR000717 | InterPro:PCI_dom | InterPro:SAC3/GANP/THP3 |
| ncoils:Coil | PANTHER:PTHR12436 | PANTHER:PTHR12436:SF17 | PFAM:PF03399 | PFscan:PS50250 | SEG:seg |
| MapMan:16.11.2.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:139068338..139079836
Molecular Weight (calculated)
197284.0 Da
IEP (calculated)
6.688
GRAVY (calculated)
-0.465
Length
1790 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEASGFGRDA GPLNRGPGSA PLAFGAGAAT APSPAAQPAP VQFPSASPAV PFVPPSSRFP SARPQLSAAA PISRPTSPIP IPAPSARPAA AAPGASGPVR
0101: FPSPLRAVDP GAAAATARHT ARHLQPQPRV AAPSIGRPMH PGISSRSRSP PNLSNQRVNV PPENDNGMGQ RRLVNYADPL FENESAQSSV QMRMQPPETG
0201: KTARSPPLDM SRQFRPSSSL PKFPPTQRAE PHDHVQMPNL SPSKIGIQNQ SPFHDARATF SPLLNSNLVP GNGRPRPASG TSTSSSSVLG GAAQQEMNDH
0301: MREQRFSAPL QSRTMDHSIS KRSRSPTLSY QDVDGAEARH GTGANARRLI NYPDTLVDDV SIETSKRMRA PSSEFTNMPK SPPSDIRDNI RPAPAGFGSS
0401: NVAAQNLRSQ ADIQRSEASP LKVGSQIKSR IGDVRSPPYQ QFRPSDTYSK EYSTPTFSPP KPSILNSRSV TPPLDDGDDF IPSTELEREK QAKAKRLARF
0501: NVELSRPVEN INDLAKADKQ KQASSMGKVP VRSNDSTMAD MDPPELAAIL GLCSYMCPEP ERAERERKGD LDRYERLGGD RNQTTELLAV KKYTRTAERD
0601: AELIRPLPVL QKTMSYLLSL MDHTYDDSFL GLYNFLWDRM RAIRMDLRMQ HFFNQEAISM LEQMIRLHIV AMHELCEYSK GEGFSEGFDA HLNIEQMNKT
0701: SVELFQMYED HRRNGVLFST EQEFRGYYAL LKLDKHPGYK VEPSELSLDL AKMSREIRGS PDVLFAREVA RACRMGNYIA FFRLARKATY LQACLMHAHF
0801: AKVRRQALAS LHSGLQIGQG IPISHVVEWL AMEDEDIESL LEYHGFGSKQ YEGPYLVKEG PFLNSESDFP SGCSELVHSK KSQRIVDDVS SGPVCAPTGQ
0901: KATVAPYSVG FPSPASKREQ VPPRSALVIP VSAKKEFGPS FSGPVSPTSS GQITSPYSGL FSPKAGNKQF NSTYSSPISP TGSRKGSVPV ILSTSLRATK
1001: HALSHTGWMD DQRVASLKAK GKITMTDDFI ISEDQNGDFV DFSREQMEIP QSEAYTQHID ALVATIVSHP LADGVSSDYA HMHEEEDELR AHGSGSDTDL
1101: DDESPSCHQV NLIERVWPTG SLLPGHEDGD YQNNNETTYD SLPIVVSPKK TISDERLKMI LRKWRQRAAD QRSLREQKNA LAIAALNSLS LGPPVHQTAV
1201: VPKHAVHELD IGHAFKERYT RQQRSWSRLN VSELAGPILT ERKPDARCIC WKMLVLVPPS AMKSQSNNVA SRWLLKKLMG SGNEDNGLLL TSADLSIWRT
1301: WLSSPSVCCL SVVRASDQQV IGNEIADSTN CIVFVVSESI PWEMQKARFS SLLASIPPQS CLPLLILSGD TYNEGYDYAS QNVIDKLGVS GLSEGKIASS
1401: LVVFLAGSCT EGYINGFFDD DKLREGLKWM ANSFPLEPDV ILVKTHELLL NYLNPSLELL NKRVAPEVGP EHCISVFNNA VSQLGEEILA AAYRSPNQWP
1501: ALEIDLLERS SSERMFTEMF LPSIGWSSPS RIQPLVETVK SLQLPEFSDD LSWLKQGSYM GRQIQDQKLY LEECLTRYLT QSARLLNGAQ AVAEAKIMVQ
1601: KGVDLELRDS NHYLVPNWVT IFRRICNWRL ARLSTGDFSE AYVLSQRLYQ PPAADSNGAT QHGLTANSDT IGEAPILEDH DMMPAVPSGL SLDEIIGVSC
1701: DLDSDSPPPP RPLSPPLPTP ACDEPQALAH INGEVNPVHG ATHDNTYDAP PRRVELRDLV PLKWDDELAK LEQQCAKLQS KIDEKLFIYF
0101: FPSPLRAVDP GAAAATARHT ARHLQPQPRV AAPSIGRPMH PGISSRSRSP PNLSNQRVNV PPENDNGMGQ RRLVNYADPL FENESAQSSV QMRMQPPETG
0201: KTARSPPLDM SRQFRPSSSL PKFPPTQRAE PHDHVQMPNL SPSKIGIQNQ SPFHDARATF SPLLNSNLVP GNGRPRPASG TSTSSSSVLG GAAQQEMNDH
0301: MREQRFSAPL QSRTMDHSIS KRSRSPTLSY QDVDGAEARH GTGANARRLI NYPDTLVDDV SIETSKRMRA PSSEFTNMPK SPPSDIRDNI RPAPAGFGSS
0401: NVAAQNLRSQ ADIQRSEASP LKVGSQIKSR IGDVRSPPYQ QFRPSDTYSK EYSTPTFSPP KPSILNSRSV TPPLDDGDDF IPSTELEREK QAKAKRLARF
0501: NVELSRPVEN INDLAKADKQ KQASSMGKVP VRSNDSTMAD MDPPELAAIL GLCSYMCPEP ERAERERKGD LDRYERLGGD RNQTTELLAV KKYTRTAERD
0601: AELIRPLPVL QKTMSYLLSL MDHTYDDSFL GLYNFLWDRM RAIRMDLRMQ HFFNQEAISM LEQMIRLHIV AMHELCEYSK GEGFSEGFDA HLNIEQMNKT
0701: SVELFQMYED HRRNGVLFST EQEFRGYYAL LKLDKHPGYK VEPSELSLDL AKMSREIRGS PDVLFAREVA RACRMGNYIA FFRLARKATY LQACLMHAHF
0801: AKVRRQALAS LHSGLQIGQG IPISHVVEWL AMEDEDIESL LEYHGFGSKQ YEGPYLVKEG PFLNSESDFP SGCSELVHSK KSQRIVDDVS SGPVCAPTGQ
0901: KATVAPYSVG FPSPASKREQ VPPRSALVIP VSAKKEFGPS FSGPVSPTSS GQITSPYSGL FSPKAGNKQF NSTYSSPISP TGSRKGSVPV ILSTSLRATK
1001: HALSHTGWMD DQRVASLKAK GKITMTDDFI ISEDQNGDFV DFSREQMEIP QSEAYTQHID ALVATIVSHP LADGVSSDYA HMHEEEDELR AHGSGSDTDL
1101: DDESPSCHQV NLIERVWPTG SLLPGHEDGD YQNNNETTYD SLPIVVSPKK TISDERLKMI LRKWRQRAAD QRSLREQKNA LAIAALNSLS LGPPVHQTAV
1201: VPKHAVHELD IGHAFKERYT RQQRSWSRLN VSELAGPILT ERKPDARCIC WKMLVLVPPS AMKSQSNNVA SRWLLKKLMG SGNEDNGLLL TSADLSIWRT
1301: WLSSPSVCCL SVVRASDQQV IGNEIADSTN CIVFVVSESI PWEMQKARFS SLLASIPPQS CLPLLILSGD TYNEGYDYAS QNVIDKLGVS GLSEGKIASS
1401: LVVFLAGSCT EGYINGFFDD DKLREGLKWM ANSFPLEPDV ILVKTHELLL NYLNPSLELL NKRVAPEVGP EHCISVFNNA VSQLGEEILA AAYRSPNQWP
1501: ALEIDLLERS SSERMFTEMF LPSIGWSSPS RIQPLVETVK SLQLPEFSDD LSWLKQGSYM GRQIQDQKLY LEECLTRYLT QSARLLNGAQ AVAEAKIMVQ
1601: KGVDLELRDS NHYLVPNWVT IFRRICNWRL ARLSTGDFSE AYVLSQRLYQ PPAADSNGAT QHGLTANSDT IGEAPILEDH DMMPAVPSGL SLDEIIGVSC
1701: DLDSDSPPPP RPLSPPLPTP ACDEPQALAH INGEVNPVHG ATHDNTYDAP PRRVELRDLV PLKWDDELAK LEQQCAKLQS KIDEKLFIYF
0001: MGTDAVEIGR SQDSKRKSRS DILPDQNMGF SRRNQSPVSG FENGNLVDGF QPLSSRTWMR SPSSAENNPV RSRSNPNQLI HQEQTGNSSF PYAHEVAEIQ
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
0101: EATRRKSSAV APSDKPLGDD PILSQHDSQR FSTSPPTSGT KSYTLSRSSD SQFPGQPSSV NSFNNARKTN SSPATKRTRS PPVYPIEEDI PRNSFPSQDC
0201: TEGEEQARAK RLARFKGELE PIADRPVDIQ LTKSPVNKTM KPLDNKQTFN SLESSRDALK GDALPDYENS EQPSLIIGVC PDMCPESERG ERERKGDLDH
0301: YERVDGDRNQ TSKSLAVKKY TRTAEREAIL IRPMPILQNT MEYLLSLLDR PYNENFLGMY NFLWDRMRAI RMDLRMQHIF NQEAITLLEQ MIRLHIIAMH
0401: ELCEYTKGEG FSEGFDAHLN IEQMNKTSVE LFQMYDDHRK KGITVPTEKE FRGYYALLKL DKHPGYKVEP SELSLDLANM TPEIRQTSEV LFARNVARAC
0501: RTGNFIAFFR LARKASYLQA CLMHAHFSKL RTQALASLHS GLQINQGLPV SDMSNWIGME EEDIEALLEY HGFSIKVFEE PYMVKNDLFL HADKDYKTKC
0601: SKLVHMKKSR TIVEDVSAPT VVEDVSTPFP LPSLITEATI GNQQCITAHK HEMPPARSLK KQTSMRLFDK EVADSKTSLL AEEDKPMGTF VMNPPGPFVI
0701: NPVVHQEKQN DLTSAGGFHS PVKLYSPFGS PKFPQTKSSN LEKQPNDDRI GMSPGEIKFS IIGDVYTNHV PGPALQQSPK SMPMEIMPVT TIAECPTSVE
0801: NKYALEESVP EAAMICTLEK EFNDIDEEDE DEDGVILNQY DEEVAKAKLK LIIRLWKRWS SRQSELRERR QLAAAAALNS LSLGTPIRFS KTDQSRACGE
0901: FNIDQAMRRR FEEREKSWSR LNISDVIADI LVGRNPESKC ISWKVVLCTQ TKSVNSSSSA SQVTHSAASR WLSSKLMPHA EHSSLNDDNL LFSAPGVSVW
1001: NKWVANGSDI DFTCCLSVAR DVEAENDMCE TTCGASAVLF LASGGLPLNL QREQLNLILE SVPNGSVLPL LVVISSCNGE HMEPDTDIVS GLGLHDIDKS
1101: KIASFSIVSI ANKSQKGQEV HFFNDSRLRD GFKWLASNSP LQPNLHHVKL RELFLTHFSF SLELLKQMPD QEVGPNICIS AFNDALETSR RNITSAAEAN
1201: PIGWPCPETM LLEDNRKECL MVKRYLPNLD WSSAENVELL SSVLENCKLP DFEDDLTWLT VGCASGAEIE NHTQRLEGCL IEYLTQRSNL MGVSLATKET
1301: GVMLERNTRL ELHNSSRYHI TPRWIGIFQR IFNWRIMGLF DASSSSAYVL KSDLNMSTSS YADKFLAEDA SYPSCPPNLP LLHEMIEISC SPLKSPPPYD
1401: DKAQRVVETG MLIDDHRDIE ESMLEKNREA CRGIDLMITE DDELGERSWR SKGREAAEKK TIEKRESERL DELLEKCNMV QNSIAEKLCI YF
Arabidopsis Description
SAC3BSAC3 family protein B [Source:UniProtKB/Swiss-Prot;Acc:F4JAU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.