Factsheet for TraesCS1B01G271000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G260400.1	Wheat	cytosol	98.72	98.72
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	84.62	77.28
Zm00001d047474_P003	Maize	mitochondrion	68.46	67.09
KXG39369	Sorghum	nucleus	67.69	67.01
GSMUA_Achr8P09880_001	Banana	nucleus	51.28	49.14
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	42.56	48.68
VIT_13s0067g01060.t01	Wine grape	cytosol	34.36	47.69
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	46.92	44.96
CDY07542	Canola	plastid	43.33	43.67
VIT_13s0067g02460.t01	Wine grape	cytosol	25.9	43.53
VIT_13s0067g01430.t01	Wine grape	plastid	46.67	42.92
Bra003181.1-P	Field mustard	mitochondrion, plastid	42.31	42.86
CDX67598	Canola	plastid	41.79	42.45
KRH20594	Soybean	plastid	43.33	41.73
VIT_13s0067g01260.t01	Wine grape	plastid	46.67	41.65
Os03t0352200-01	Rice	plasma membrane	18.46	40.91
AT3G54380.1	Thale cress	mitochondrion	42.31	40.64
PGSC0003DMT400005365	Potato	plastid	41.28	38.61
Solyc06g061120.2.1	Tomato	plastid	40.51	37.89
KRH13256	Soybean	plastid	28.21	29.73
VIT_18s0041g00180.t01	Wine grape	mitochondrion	11.28	29.14
TraesCS2B01G166300.1	Wheat	cytosol	27.95	6.09

Protein Annotations

EnsemblPlants:TraesCS1B01G271000.1	EnsemblPlantsGene:TraesCS1B01G271000	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3	PANTHER:PTHR12436	PANTHER:PTHR12436:SF3
PFAM:PF03399	SEG:seg	MapMan:16.11.2.1	:	:	:

Description

No Description!

Coordinates

chr1B:-:476333099..476347096

Molecular Weight (calculated)

44518.6 Da

IEP (calculated)

8.427

GRAVY (calculated)

-0.321

Length

390 amino acids

Sequence
(BLAST)

001: MDRRDGAGNR GRSYARGNAR GRGWRGRCED RGRPSTQPPP STASAAAVIP SDAPPIVGTC PDMCPATERA QRERLRDLAV FERVCSDPMR TSHSLAVKKF
101: CRTISSTGIQ ASDIRPLPVL RETMDYLWHL LNSSDYPFEI VHDFIFDRTR SVRQDLSIQN LVNDQAIGIY EDVIKFHILS HQRLARSCQD SDASSLCYLN
201: TEQMMKCLLS LFDMYHTIHK INSQSNKEAE YYSFFVLLHL GCKIPKMANS LSFWYSQLPA SIVRSKEMIF ARTILRCYHL GNFKRFFCMI ADEATELQLC
301: LVEPFLNEVR ARALMYLNHS GYKLQHHPLT HLSDILMIEE LELEDLCRIC GLEISRSGDT KAFAPKQTTF SLPTPSSKSS GIYISREIKR

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.