Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- plasma membrane 2
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g02460.t01 | Wine grape | cytosol | 54.97 | 35.78 |
| VIT_13s0067g01060.t01 | Wine grape | cytosol | 54.97 | 29.54 |
| VIT_13s0067g02370.t01 | Wine grape | endoplasmic reticulum, golgi | 54.97 | 24.34 |
| VIT_13s0067g02620.t01 | Wine grape | mitochondrion, plastid | 54.97 | 20.39 |
| VIT_13s0067g01430.t01 | Wine grape | plastid | 54.97 | 19.58 |
| VIT_13s0067g01260.t01 | Wine grape | plastid | 54.97 | 18.99 |
| PGSC0003DMT400005365 | Potato | plastid | 43.05 | 15.59 |
| KRH20594 | Soybean | plastid | 39.74 | 14.81 |
| Solyc06g061120.2.1 | Tomato | plastid | 40.4 | 14.63 |
| CDX67598 | Canola | plastid | 35.76 | 14.06 |
| Bra003181.1-P | Field mustard | mitochondrion, plastid | 35.76 | 14.03 |
| CDY07542 | Canola | plastid | 35.76 | 13.95 |
| GSMUA_Achr8P09880_001 | Banana | nucleus | 35.76 | 13.27 |
| AT3G54380.1 | Thale cress | mitochondrion | 34.44 | 12.81 |
| Zm00001d047474_P003 | Maize | mitochondrion | 31.79 | 12.06 |
| KXG39369 | Sorghum | nucleus | 31.13 | 11.93 |
| KRH13256 | Soybean | plastid | 28.48 | 11.62 |
| TraesCS1D01G260400.1 | Wheat | cytosol | 29.8 | 11.54 |
| TraesCS1B01G271000.1 | Wheat | cytosol | 29.14 | 11.28 |
| HORVU4Hr1G048800.3 | Barley | cytosol, peroxisome | 29.8 | 10.54 |
| VIT_05s0020g02350.t01 | Wine grape | nucleus | 17.22 | 1.72 |
| Os03t0352200-01 | Rice | plasma membrane | 1.99 | 1.7 |
Protein Annotations
| ArrayExpress:VIT_18s0041g00180 | EMBL:FN596744 | EnsemblPlants:VIT_18s0041g00180.t01 | EnsemblPlantsGene:VIT_18s0041g00180 | Gene3D:1.25.40.990 | InterPro:SAC3/GANP/THP3 |
| PANTHER:PTHR12436 | PANTHER:PTHR12436:SF3 | PFAM:PF03399 | ProteinID:CBI39356 | ProteinID:CBI39356.3 | UniParc:UPI0001BE4FDE |
| UniProt:D7U9E2 | MapMan:16.11.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:24530454..24534929
Molecular Weight (calculated)
17766.0 Da
IEP (calculated)
9.480
GRAVY (calculated)
0.150
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MCFARRLLKL FWMGNYKRFL CTTATEASYL QYYIIEPYIN EVRALALSCV NYCGYKLHPY PIAHLSKLLM MKELDVESFL MLVVLRPALM NGEISSYQPS
101: KQTSIIPRKS FQATAFWVWN TFRGNNQLEL VTLSNFLLYK YNLHVQPFLI P
101: KQTSIIPRKS FQATAFWVWN TFRGNNQLEL VTLSNFLLYK YNLHVQPFLI P
001: MILPCIGKRE RVTRERLRDL AVFERLYGNP SKSSTEIAVK KFCRTLSAAD VQASDVRPLP VLEETLRYLL SLLDSKEHPF EVVHDFIFDR TRSIRQDLSI
101: QNLANERVIY LYEEMVKFHV ISHERLQSCS GTSISSMHHL NMEQLAKTLT SLYNIYDANR KPDYIYENEA EFRSLYVLLH LNPSSGVMGE PLSLWFRKLT
201: FALVKSKEIC FVRNLLRLYR MGNYKNFLSR TASEATYLQY CISEHHIREM RLVAVQYINN VCYKLQPYPL LRLSQNLKMK ELDVESLCHE CGLETCTDPD
301: GFTVLPVKQS TFRSPEDKFK VYDLIGIERI KMSI
101: QNLANERVIY LYEEMVKFHV ISHERLQSCS GTSISSMHHL NMEQLAKTLT SLYNIYDANR KPDYIYENEA EFRSLYVLLH LNPSSGVMGE PLSLWFRKLT
201: FALVKSKEIC FVRNLLRLYR MGNYKNFLSR TASEATYLQY CISEHHIREM RLVAVQYINN VCYKLQPYPL LRLSQNLKMK ELDVESLCHE CGLETCTDPD
301: GFTVLPVKQS TFRSPEDKFK VYDLIGIERI KMSI
Arabidopsis Description
SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.