Factsheet for GSMUA_Achr8P09880_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g01060.t01	Wine grape	cytosol	40.54	58.72
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	47.91	57.18
VIT_13s0067g02460.t01	Wine grape	cytosol	31.45	55.17
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	52.33	52.33
Zm00001d047474_P003	Maize	mitochondrion	50.61	51.76
TraesCS1D01G260400.1	Wheat	cytosol	49.14	51.28
TraesCS1B01G271000.1	Wheat	cytosol	49.14	51.28
KXG39369	Sorghum	nucleus	49.39	51.02
VIT_13s0067g01430.t01	Wine grape	plastid	52.58	50.47
VIT_13s0067g01260.t01	Wine grape	plastid	52.33	48.74
KRH20594	Soybean	plastid	48.4	48.64
Bra003181.1-P	Field mustard	mitochondrion, plastid	45.21	47.79
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	49.63	47.31
CDY07542	Canola	plastid	44.72	47.03
CDX67598	Canola	plastid	44.23	46.88
PGSC0003DMT400005365	Potato	plastid	45.7	44.6
Solyc06g061120.2.1	Tomato	plastid	44.96	43.88
AT3G54380.1	Thale cress	mitochondrion	43.73	43.84
VIT_18s0041g00180.t01	Wine grape	mitochondrion	13.27	35.76
KRH13256	Soybean	plastid	31.2	34.32
Os03t0352200-01	Rice	plasma membrane	13.76	31.82
GSMUA_Achr5P27420_001	Banana	cytosol	27.76	9.05

Protein Annotations

EnsemblPlants:GSMUA_Achr8P09880_001	EnsemblPlants:GSMUA_Achr8T09880_001	EnsemblPlantsGene:GSMUA_Achr8G09880_001	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3	PANTHER:PTHR12436
PANTHER:PTHR12436:SF3	PFAM:PF03399	SEG:seg	UniParc:UPI000294916A	UniProt:M0TP41	MapMan:16.11.2.1

Description

SAC3/GANP family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G09880_001]

Coordinates

chr8:-:7009408..7015917

Molecular Weight (calculated)

46860.7 Da

IEP (calculated)

8.478

GRAVY (calculated)

-0.416

Length

407 amino acids

Sequence
(BLAST)

001: MEERTGRGRG LGLRPARKAL DPSSSIWKPM RSCPARDPKE TSAEAFRERS NPHLDDDDNL RSPNSPYLVG TCPDMCPAKE RAQRESLRDL SVFERLNGNP
101: ARTSPHLAVK KFCRTISTVD IQESDIRSPP VLQRTLKHLI NLVNSEEHPF EVVHDFVFDR TRSIRQDLSM QNIIDDQAIS MYEEMVKFHI VSHNRLAMHW
201: GKSDLSSLCH LNIEQLMKCL LTLFKLYDLN RLSRSLHTNE AEFYSFFVLL HLGGKIPKMG DSLSLWYRQL SLPILQSKKM HFARALMRYS QMGNYKRFFC
301: SLEAEASDLQ LCLVEPFLDE IRAQAISHVN YSGYKLHPYP LMHLSKILMI KESELEDLCH VCGLETSIDE AGMKALPVKQ TKFSLPKSGF RSYCLSAIDD
401: VKRRKDL

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.