Factsheet for Zm00001d047474_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39369	Sorghum	nucleus	86.93	87.82
TraesCS1B01G271000.1	Wheat	cytosol	67.09	68.46
TraesCS1D01G260400.1	Wheat	cytosol	66.83	68.21
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	68.34	63.7
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	44.22	51.61
VIT_13s0067g01060.t01	Wine grape	cytosol	36.43	51.6
GSMUA_Achr8P09880_001	Banana	nucleus	51.76	50.61
Os03t0352200-01	Rice	plasma membrane	21.86	49.43
VIT_13s0067g02460.t01	Wine grape	cytosol	27.39	46.98
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	47.99	46.93
VIT_13s0067g01430.t01	Wine grape	plastid	47.74	44.81
KRH20594	Soybean	plastid	45.48	44.69
Bra003181.1-P	Field mustard	mitochondrion, plastid	43.22	44.68
CDY07542	Canola	plastid	42.96	44.19
CDX67598	Canola	plastid	42.46	44.01
VIT_13s0067g01260.t01	Wine grape	plastid	47.49	43.25
AT3G54380.1	Thale cress	mitochondrion	43.47	42.61
Solyc06g061120.2.1	Tomato	plastid	42.46	40.53
PGSC0003DMT400005365	Potato	plastid	42.46	40.53
KRH13256	Soybean	plastid	30.65	32.97
VIT_18s0041g00180.t01	Wine grape	mitochondrion	12.06	31.79
Zm00001d005112_P001	Maize	golgi, peroxisome, plasma membrane	11.31	10.9
Zm00001d046871_P001	Maize	cytosol	11.56	9.91
Zm00001d044309_P001	Maize	plastid	10.05	9.59
Zm00001d045881_P001	Maize	cytosol, plastid	10.05	8.16
Zm00001d022343_P001	Maize	plastid	29.4	6.45
Zm00001d019076_P001	Maize	cytosol	11.81	6.06
Zm00001d022344_P001	Maize	cytosol	9.8	3.21
Zm00001d022346_P001	Maize	cytosol	18.09	2.63

Protein Annotations

EnsemblPlants:Zm00001d047474_P003	EnsemblPlants:Zm00001d047474_T003	EnsemblPlantsGene:Zm00001d047474	EntrezGene:103639133	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3
PANTHER:PTHR12436	PANTHER:PTHR12436:SF3	PFAM:PF03399	ProteinID:AQL06647.1	SEG:seg	UniParc:UPI00022210BD
UniProt:K7VLT5	MapMan:16.11.2.1	:	:	:	:

Description

SAC3 family protein C

Coordinates

chr9:-:131320176..131324624

Molecular Weight (calculated)

45177.3 Da

IEP (calculated)

8.296

GRAVY (calculated)

-0.317

Length

398 amino acids

Sequence
(BLAST)

001: MDRRGEASHR GRSSYRGRGW RGRGRGGGRP SPSPPSSTAS PAALNPVPSL TPAVPVDDAA PIMGTCPDMC PARERAQRER LRDLAVLERV DGDPARTSLS
101: LAVKKFCRTI SSTNVLASDI RPLPVLQETM DYLLHLLDSS EHPFETIHDF IFDRTRSIRQ DLSMQNIVND QAVQIYEDAV TFHIRSHQRL STSCQDSAAS
201: SLCYLNMEQL TKCLLSLYDM YHVLHKCDSH SKKEAEYYSF YVLLHLGCKI HKMIDSLSLW YGQLATPVRR SKEMIFARSL LRCYRLGNFK RFFCMVAAEA
301: TDLQLRLVEP FLNEVRARAL MYFNYSGYKL QHHPLEHLSG ILMIEESELE SLCGICGLEI TRSEGTKAFV PKQTSFNLPT SMPQSNGIYV SREFERLI

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.