CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047474_P003	Maize	mitochondrion	87.82	86.93
TraesCS1B01G271000.1	Wheat	cytosol	67.01	67.69
TraesCS1D01G260400.1	Wheat	cytosol	66.75	67.44
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	67.51	62.3
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	44.16	51.03
VIT_13s0067g01060.t01	Wine grape	cytosol	36.04	50.53
GSMUA_Achr8P09880_001	Banana	nucleus	51.02	49.39
VIT_13s0067g02460.t01	Wine grape	cytosol	27.41	46.55
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	47.72	46.19
Os03t0352200-01	Rice	plasma membrane	20.05	44.89
VIT_13s0067g01430.t01	Wine grape	plastid	47.46	44.1
Bra003181.1-P	Field mustard	mitochondrion, plastid	42.64	43.64
KRH20594	Soybean	plastid	44.67	43.46
CDY07542	Canola	plastid	42.13	42.89
CDX67598	Canola	plastid	41.62	42.71
VIT_13s0067g01260.t01	Wine grape	plastid	47.21	42.56
Solyc06g061120.2.1	Tomato	plastid	44.67	42.21
AT3G54380.1	Thale cress	mitochondrion	43.15	41.87
PGSC0003DMT400005365	Potato	plastid	43.65	41.25
KRH13256	Soybean	plastid	30.2	32.16
VIT_18s0041g00180.t01	Wine grape	mitochondrion	11.93	31.13
OQU90370	Sorghum	plastid	27.92	6.22

Protein Annotations

EnsemblPlants:KXG39369	EnsemblPlantsGene:SORBI_3001G371200	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3	ncoils:Coil	PANTHER:PTHR12436
PANTHER:PTHR12436:SF3	PFAM:PF03399	ProteinID:KXG39369	ProteinID:KXG39369.1	SEG:seg	UniParc:UPI00081ABAD4
UniProt:A0A1B6QN68	MapMan:16.11.2.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:65953562..65957660

Molecular Weight (calculated)

44789.7 Da

IEP (calculated)

8.081

GRAVY (calculated)

-0.383

Length

394 amino acids

Sequence
(BLAST)

001: MDRSGEASHR GRSSYSGRGW RGRGRGGGRP SPSPPSSTGS PAALNPTPTP AVPVDDAAPI VGTCPDMCPA RERAQRERLR DLAVLERVGG DPTRTSPSLA
101: VKKFCRTISS TNILPSDIRP LPVLQETMDY LLHLLDSSEH SFETIHDFIF DRTRSIRQDL SMQNIVNDQA VQIYEDVVTF HIRSHQRLST SCQDSDTSSL
201: CYLNMEQLTK CLLSLYDMYH VLHKHDSHSK REAEYYSFYV LLHLGCKIHK MIDSLYLWYG QLASPVRRSK EMIFARTLLR CYHLGNFKRF FCMVASEATD
301: LQLRVVEPFL NEVRARALMY FNHSGYKLQH HPLEHLSGIL MIEEAELESL CRICGLEISK SEGMKAFVPK QTSFTLPTSM PQTNGIYISR EVER

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.