Factsheet for Solyc06g061120.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005365	Potato	plastid	85.61	85.61
VIT_13s0067g01060.t01	Wine grape	cytosol	41.73	61.92
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	49.88	61.0
VIT_13s0067g02460.t01	Wine grape	cytosol	32.37	58.19
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	55.88	57.25
VIT_13s0067g01430.t01	Wine grape	plastid	55.88	54.95
VIT_13s0067g01260.t01	Wine grape	plastid	55.16	52.63
KRH20594	Soybean	plastid	51.08	52.59
Bra003181.1-P	Field mustard	mitochondrion, plastid	47.72	51.69
CDX67598	Canola	plastid	47.0	51.04
CDY07542	Canola	plastid	47.0	50.65
AT3G54380.1	Thale cress	mitochondrion	46.52	47.78
GSMUA_Achr8P09880_001	Banana	nucleus	43.88	44.96
KXG39369	Sorghum	nucleus	42.21	44.67
Zm00001d047474_P003	Maize	mitochondrion	40.53	42.46
TraesCS1D01G260400.1	Wheat	cytosol	37.89	40.51
TraesCS1B01G271000.1	Wheat	cytosol	37.89	40.51
VIT_18s0041g00180.t01	Wine grape	mitochondrion	14.63	40.4
KRH13256	Soybean	plastid	33.81	38.11
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	37.65	36.77
Os03t0352200-01	Rice	plasma membrane	11.51	27.27
Solyc12g035670.1.1	Tomato	nucleus	27.1	7.22

Protein Annotations

EnsemblPlants:Solyc06g061120.2.1	EnsemblPlantsGene:Solyc06g061120.2	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3	PANTHER:PTHR12436	PANTHER:PTHR12436:SF3
PFAM:PF03399	SEG:seg	UniParc:UPI000276657A	UniProt:K4C6U2	MapMan:16.11.2.1	:

Description

SAC3 family protein C [Source:Projected from Arabidopsis thaliana (AT3G54380) UniProtKB/Swiss-Prot;Acc:Q67XV2]

Coordinates

chr6:+:39129766..39136050

Molecular Weight (calculated)

47967.1 Da

IEP (calculated)

8.663

GRAVY (calculated)

-0.497

Length

417 amino acids

Sequence
(BLAST)

001: MAGRSQPPYR PRPNFSSSSS RSYHPSQPSR NFQSHHTKNF NSSTPNGTPI QNNASDNKTS SSNWDKVIDE DIDDIQSLVG TCPFMCPVEE REKRERLRDL
101: AVFERLHGNP RQSSPSLAVK KFCRTISVKT LQDSDVRPLS VLEDTLNYLC NLLDSTEHPF EVVHDFIFDR MRSIRQDLSM QNISCSRVVS MYERMVKFHI
201: ISQHKLRRCS GSNISSLSYL NMEQLTKALA TLFNLYEANR TTAPIFKNEA DFFSFYVLLH LDSKTQGTGE TLSLWFRRVP SHIMKSTEMN FARKILRYFK
301: LGFFKKFIHT TESEASYLQY CIIEPSINEV RSLAISCVNH GGYKPQPFPL VALSKLLMMK EWDVASFCKD SGLQTSVDEE GNSCLPTKQT TLIHPKGGLH
401: KYYPLESERF ERFSVEL

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.