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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07542 Canola plastid 72.66 76.23
Bra003181.1-P Field mustard mitochondrion, plastid 71.67 75.58
CDX67598 Canola plastid 70.44 74.48
VIT_13s0067g01060.t01 Wine grape cytosol 40.89 59.07
VIT_13s0067g02370.t01 Wine grape endoplasmic reticulum, golgi 48.03 57.18
VIT_13s0067g02620.t01 Wine grape mitochondrion, plastid 52.96 52.83
VIT_13s0067g02460.t01 Wine grape cytosol 29.8 52.16
KRH20594 Soybean plastid 51.97 52.1
VIT_13s0067g01430.t01 Wine grape plastid 52.71 50.47
VIT_13s0067g01260.t01 Wine grape plastid 52.71 48.97
PGSC0003DMT400005365 Potato plastid 48.28 47.0
Solyc06g061120.2.1 Tomato plastid 47.78 46.52
GSMUA_Achr8P09880_001 Banana nucleus 43.84 43.73
Zm00001d047474_P003 Maize mitochondrion 42.61 43.47
KXG39369 Sorghum nucleus 41.87 43.15
TraesCS1B01G271000.1 Wheat cytosol 40.64 42.31
TraesCS1D01G260400.1 Wheat cytosol 40.39 42.05
HORVU4Hr1G048800.3 Barley cytosol, peroxisome 39.66 37.7
KRH13256 Soybean plastid 33.99 37.3
VIT_18s0041g00180.t01 Wine grape mitochondrion 12.81 34.44
Os03t0352200-01 Rice plasma membrane 13.05 30.11
AT3G06290.1 Thale cress plastid 28.82 6.89
Protein Annotations
Gene3D:1.25.40.990MapMan:16.11.2.1EntrezGene:824604ProteinID:AEE79223.1ProteinID:AEE79224.1EMBL:AF386980
EMBL:AK176716ArrayExpress:AT3G54380EnsemblPlantsGene:AT3G54380RefSeq:AT3G54380TAIR:AT3G54380RefSeq:AT3G54380-TAIR-G
EnsemblPlants:AT3G54380.1TAIR:AT3G54380.1EMBL:AY087832EMBL:BT008465ProteinID:CAB81802.1ProteinID:CAB81803.1
GO:GO:0008150InterPro:IPR000717RefSeq:NP_001190086.1RefSeq:NP_851016.1InterPro:PCI_domPFAM:PF03399
PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PFscan:PS50250PANTHER:PTHR12436PANTHER:PTHR12436:SF3UniProt:Q67XV2InterPro:SAC3/GANP/THP3
UniParc:UPI0000163713SEG:seg::::
Description
SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
Coordinates
chr3:-:20133893..20136811
Molecular Weight (calculated)
46976.0 Da
IEP (calculated)
8.386
GRAVY (calculated)
-0.525
Length
406 amino acids
Sequence
(BLAST)
001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.