Factsheet for VIT_13s0067g02460.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g01060.t01	Wine grape	cytosol	96.55	79.72
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	96.12	65.4
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	99.14	56.51
VIT_18s0041g00180.t01	Wine grape	mitochondrion	35.78	54.97
VIT_13s0067g01430.t01	Wine grape	plastid	99.14	54.25
VIT_13s0067g01260.t01	Wine grape	plastid	96.12	51.03
KRH20594	Soybean	plastid	63.79	36.54
PGSC0003DMT400005365	Potato	plastid	60.78	33.81
Solyc06g061120.2.1	Tomato	plastid	58.19	32.37
CDY07542	Canola	plastid	53.45	32.04
Bra003181.1-P	Field mustard	mitochondrion, plastid	53.02	31.95
CDX67598	Canola	plastid	52.59	31.77
GSMUA_Achr8P09880_001	Banana	nucleus	55.17	31.45
AT3G54380.1	Thale cress	mitochondrion	52.16	29.8
KRH13256	Soybean	plastid	44.83	28.11
KXG39369	Sorghum	nucleus	46.55	27.41
Zm00001d047474_P003	Maize	mitochondrion	46.98	27.39
TraesCS1B01G271000.1	Wheat	cytosol	43.53	25.9
TraesCS1D01G260400.1	Wheat	cytosol	43.1	25.64
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	43.97	23.89
Os03t0352200-01	Rice	plasma membrane	3.45	4.55
VIT_05s0020g02350.t01	Wine grape	nucleus	26.29	4.03

Protein Annotations

ArrayExpress:VIT_13s0067g02460	EMBL:FN595533	EnsemblPlants:VIT_13s0067g02460.t01	EnsemblPlantsGene:VIT_13s0067g02460	Gene3D:1.25.40.990	InterPro:SAC3/GANP/THP3
PANTHER:PTHR12436	PANTHER:PTHR12436:SF3	PFAM:PF03399	ProteinID:CBI25805	ProteinID:CBI25805.3	UniParc:UPI0001BE2D5A
UniProt:D7T5M2	MapMan:16.11.2.1	:	:	:	:

Description

No Description!

Coordinates

chr13_random:-:1341173..1343539

Molecular Weight (calculated)

27108.0 Da

IEP (calculated)

8.396

GRAVY (calculated)

-0.228

Length

232 amino acids

Sequence
(BLAST)

001: MQNIVNDQTI HMYEEMVKFH IISHHKLRSC SNKPNFSSVH YLNMEQLKKC LISLYALYEE NRNSNSIYKN EPEFCSFHVL LHLGSNNQPL GESLSLWLGR
101: VPSLILKSKE MCFARRLLRL FRMGNYKRFL CTTATEASYL QYYIIEPYIN EVRALALSCV NYCGYKLHPY PIAHLSKLLM MKELDVESFC NACGLETSTG
201: ERGNKFLSTK QTNFHYPKEV FPSYCLLGLE HF

Best Arabidopsis Sequence Match ( AT3G54380.1 )
(BLAST)

001: MNRRNRGSSS SSSRVSNTYG NRQFSDNPRT GSGGGVNESF QRRSDAPHKR NNEKDESKHK DEDPADVSLI VGTCSSMCPE RERVTRERLR DLAVFERLYG
101: NPSKSSTEIA VKKFCRTLSA ADVQASDVRP LPVLEETLRY LLSLLDSKEH PFEVVHDFIF DRTRSIRQDL SIQNLANERV IYLYEEMVKF HVISHERLQS
201: CSGTSISSMH HLNMEQLAKT LTSLYNIYDA NRKPDYIYEN EAEFRSLYVL LHLNPSSGVM GEPLSLWFRK LTFALVKSKE ICFVRNLLRL YRMGNYKNFL
301: SRTASEATYL QYCISEHHIR EMRLVAVQYI NNVCYKLQPY PLLRLSQNLK MKELDVESLC HECGLETCTD PDGFTVLPVK QSTFRSPEDK FKVYDLIGIE
401: RIKMSI

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.