CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20594	Soybean	plastid	57.3	52.35
VIT_13s0067g01060.t01	Wine grape	cytosol	36.22	47.69
VIT_13s0067g02460.t01	Wine grape	cytosol	28.11	44.83
VIT_13s0067g02370.t01	Wine grape	endoplasmic reticulum, golgi	39.46	42.82
VIT_13s0067g02620.t01	Wine grape	mitochondrion, plastid	41.89	38.08
VIT_13s0067g01430.t01	Wine grape	plastid	41.62	36.32
Bra003181.1-P	Field mustard	mitochondrion, plastid	37.3	35.84
CDX67598	Canola	plastid	37.03	35.68
CDY07542	Canola	plastid	36.49	34.88
VIT_13s0067g01260.t01	Wine grape	plastid	41.08	34.78
PGSC0003DMT400005365	Potato	plastid	38.38	34.05
AT3G54380.1	Thale cress	mitochondrion	37.3	33.99
Solyc06g061120.2.1	Tomato	plastid	38.11	33.81
GSMUA_Achr8P09880_001	Banana	nucleus	34.32	31.2
Zm00001d047474_P003	Maize	mitochondrion	32.97	30.65
KXG39369	Sorghum	nucleus	32.16	30.2
VIT_18s0041g00180.t01	Wine grape	mitochondrion	11.62	28.48
TraesCS1D01G260400.1	Wheat	cytosol	30.0	28.46
TraesCS1B01G271000.1	Wheat	cytosol	29.73	28.21
HORVU4Hr1G048800.3	Barley	cytosol, peroxisome	31.35	27.17
Os03t0352200-01	Rice	plasma membrane	7.84	16.48
KRH20952	Soybean	nucleus	25.14	6.16
KRH11322	Soybean	nucleus	25.41	6.04

Protein Annotations

EMBL:ACUP02009677	EnsemblPlants:KRH13256	EnsemblPlantsGene:GLYMA_15G225900	Gene3D:1.25.40.990	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:SAC3/GANP/THP3	ncoils:Coil	PANTHER:PTHR12436	PANTHER:PTHR12436:SF3	PFAM:PF03399
ProteinID:KRH13256	ProteinID:KRH13256.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0006ED4F4B	UniProt:A0A0R0GDE8
MapMan:16.11.2.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:41525953..41532430

Molecular Weight (calculated)

42765.8 Da

IEP (calculated)

8.762

GRAVY (calculated)

-0.208

Length

370 amino acids

Sequence
(BLAST)

001: MCPVFERLHG NPGKSSPALA VKKLSIAAER HPSATDTCVA ARFRVAAGAA TIAAERRGLR SGFSCRYFEA LVVLSGFSGS ILCCFFCFVL PRERERERER
101: ERERERERER EREREGGRAL CCFFSSDMRP ITVLEDTLNY LLSLLESKEH SFEVVHDFIF DRTRSIRQDI TMQNIVNKKT IYMYKGMGAA PWKETKHKNH
201: YGLRDTCKYN EAELWCSLSD PNTASLHHLN MEQLTKTLAS LFNLYEANRN SIHVHENAAE FHSLYVLLHL GSYSQPMGEP LSLWFRRVST PVLKSKEMCF
301: ARRILRYKDF FCTAAAQALY LQFCIMMPYI NEVRVLALSC INFGGYKLHP YPLLDLSKFL FIKVWISNCI

Best Arabidopsis Sequence Match ( AT3G54380.2 )
(BLAST)

001: MLFLVSIERE RVTRERLRDL AVFERLYGNP SKSSTEIAVK KFCRTLSAAD VQASDVRPLP VLEETLRYLL SLLDSKEHPF EVVHDFIFDR TRSIRQDLSI
101: QNLANERVIY LYEEMVKFHV ISHERLQSCS GTSISSMHHL NMEQLAKTLT SLYNIYDANR KPDYIYENEA EFRSLYVLLH LNPSSGVMGE PLSLWFRKLT
201: FALVKSKEIC FVRNLLRLYR MGNYKNFLSR TASEATYLQY CISEHHIREM RLVAVQYINN VCYKLQPYPL LRLSQNLKMK FVYFRSWMLN LYAMSVVLRH
301: VLILMGSLFY P

Arabidopsis Description

SAC3CSAC3 family protein C [Source:UniProtKB/Swiss-Prot;Acc:Q67XV2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.